Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.39□□□□□ -1.55
LDLRP01130 RPS7P6-201ENST00000485777 579 ntBASIC5.39□□□□□ -1.55
LDLRP01130 RPS17P5-201ENST00000498293 408 ntBASIC5.39□□□□□ -1.55
LDLRP01130 AC138866.2-201ENST00000508650 584 ntBASIC5.39□□□□□ -1.55
LDLRP01130 AC109481.1-201ENST00000509173 282 ntBASIC5.39□□□□□ -1.55
LDLRP01130 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.39□□□□□ -1.55
LDLRP01130 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.39□□□□□ -1.55
LDLRP01130 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.39□□□□□ -1.55
LDLRP01130 OR8K2P-201ENST00000524645 927 ntBASIC5.39□□□□□ -1.55
LDLRP01130 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.39□□□□□ -1.55
LDLRP01130 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.39□□□□□ -1.55
LDLRP01130 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.39□□□□□ -1.55
LDLRP01130 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
LDLRP01130 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.39□□□□□ -1.55
LDLRP01130 AL139124.1-201ENST00000609123 421 ntBASIC5.39□□□□□ -1.55
LDLRP01130 AC026367.3-201ENST00000619032 590 ntBASIC5.39□□□□□ -1.55
LDLRP01130 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.39□□□□□ -1.55
LDLRP01130 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.39□□□□□ -1.55
LDLRP01130 HSPD1P7-201ENST00000447985 1686 ntBASIC5.39□□□□□ -1.55
LDLRP01130 AC104964.3-201ENST00000606115 2860 ntBASIC5.39□□□□□ -1.55
LDLRP01130 MTND4P21-201ENST00000453886 1357 ntBASIC5.39□□□□□ -1.55
LDLRP01130 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LDLRP01130 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LDLRP01130 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.39□□□□□ -1.55
LDLRP01130 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
LDLRP01130 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.39□□□□□ -1.55
LDLRP01130 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.39□□□□□ -1.55
LDLRP01130 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LDLRP01130 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LDLRP01130 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LDLRP01130 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LDLRP01130 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.38□□□□□ -1.55
LDLRP01130 AC087565.3-202ENST00000642085 1603 ntBASIC5.38□□□□□ -1.55
LDLRP01130 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 GNL2P1-201ENST00000451274 2190 ntBASIC5.38□□□□□ -1.55
LDLRP01130 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.38□□□□□ -1.55
LDLRP01130 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.38□□□□□ -1.55
LDLRP01130 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
LDLRP01130 RPL35AP3-201ENST00000414680 288 ntBASIC5.38□□□□□ -1.55
LDLRP01130 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.38□□□□□ -1.55
LDLRP01130 FAR1P1-201ENST00000427163 934 ntBASIC5.38□□□□□ -1.55
LDLRP01130 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.38□□□□□ -1.55
LDLRP01130 H2AFZP6-201ENST00000444403 394 ntBASIC5.38□□□□□ -1.55
LDLRP01130 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.38□□□□□ -1.55
LDLRP01130 RN7SL269P-201ENST00000467795 305 ntBASIC5.38□□□□□ -1.55
LDLRP01130 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 RN7SL184P-201ENST00000488308 297 ntBASIC5.38□□□□□ -1.55
LDLRP01130 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.38□□□□□ -1.55
LDLRP01130 SETP12-201ENST00000514068 805 ntBASIC5.38□□□□□ -1.55
LDLRP01130 SEPT10P1-201ENST00000517342 1162 ntBASIC5.38□□□□□ -1.55
LDLRP01130 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.38□□□□□ -1.55
LDLRP01130 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.38□□□□□ -1.55
LDLRP01130 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.38□□□□□ -1.55
LDLRP01130 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.38□□□□□ -1.55
LDLRP01130 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.38□□□□□ -1.55
LDLRP01130 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.38□□□□□ -1.55
LDLRP01130 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.38□□□□□ -1.55
LDLRP01130 AC015802.2-201ENST00000589690 189 ntBASIC5.38□□□□□ -1.55
LDLRP01130 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.38□□□□□ -1.55
LDLRP01130 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.38□□□□□ -1.55
LDLRP01130 FAM27E4-201ENST00000605259 342 ntBASIC5.38□□□□□ -1.55
LDLRP01130 AC024940.4-201ENST00000605507 246 ntBASIC5.38□□□□□ -1.55
LDLRP01130 AC005972.3-201ENST00000606304 481 ntBASIC5.38□□□□□ -1.55
LDLRP01130 AC024933.1-201ENST00000608472 348 ntBASIC5.38□□□□□ -1.55
LDLRP01130 AC084036.1-201ENST00000609190 508 ntBASIC5.38□□□□□ -1.55
LDLRP01130 AC092574.1-201ENST00000609771 420 ntBASIC5.38□□□□□ -1.55
LDLRP01130 LINC00216-201ENST00000623548 1126 ntBASIC5.38□□□□□ -1.55
LDLRP01130 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.38□□□□□ -1.55
LDLRP01130 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.38□□□□□ -1.55
LDLRP01130 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.38□□□□□ -1.55
LDLRP01130 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.38□□□□□ -1.55
LDLRP01130 MFSD8-219ENST00000641228 2559 ntBASIC5.38□□□□□ -1.55
LDLRP01130 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LDLRP01130 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
LDLRP01130 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
LDLRP01130 AC012254.3-201ENST00000591183 2117 ntBASIC5.38□□□□□ -1.55
LDLRP01130 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
LDLRP01130 AL360270.2-201ENST00000562952 5985 ntBASIC5.38□□□□□ -1.55
LDLRP01130 AC092376.2-201ENST00000622621 4116 ntBASIC5.38□□□□□ -1.55
LDLRP01130 MRRFP1-201ENST00000435941 1675 ntBASIC5.37□□□□□ -1.55
LDLRP01130 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LDLRP01130 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LDLRP01130 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
LDLRP01130 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LDLRP01130 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms