Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.75□□□□□ -1.49
PROM1O43490 ZNF619P1-201ENST00000446539 752 ntBASIC5.75□□□□□ -1.49
PROM1O43490 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.75□□□□□ -1.49
PROM1O43490 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.75□□□□□ -1.49
PROM1O43490 AC112492.1-201ENST00000449607 712 ntBASIC5.75□□□□□ -1.49
PROM1O43490 PPIAP7-201ENST00000454070 489 ntBASIC5.75□□□□□ -1.49
PROM1O43490 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.75□□□□□ -1.49
PROM1O43490 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.75□□□□□ -1.49
PROM1O43490 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.75□□□□□ -1.49
PROM1O43490 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.75□□□□□ -1.49
PROM1O43490 RPL23AP40-201ENST00000487630 390 ntBASIC5.75□□□□□ -1.49
PROM1O43490 RPL7P51-201ENST00000490532 749 ntBASIC5.75□□□□□ -1.49
PROM1O43490 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.75□□□□□ -1.49
PROM1O43490 AC104109.1-201ENST00000498563 436 ntBASIC5.75□□□□□ -1.49
PROM1O43490 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.75□□□□□ -1.49
PROM1O43490 GAPDHP71-201ENST00000511530 1003 ntBASIC5.75□□□□□ -1.49
PROM1O43490 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.75□□□□□ -1.49
PROM1O43490 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.75□□□□□ -1.49
PROM1O43490 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.75□□□□□ -1.49
PROM1O43490 AP000620.1-201ENST00000527147 504 ntBASIC5.75□□□□□ -1.49
PROM1O43490 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PROM1O43490 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.75□□□□□ -1.49
PROM1O43490 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
PROM1O43490 OR7E128P-201ENST00000532736 1024 ntBASIC5.75□□□□□ -1.49
PROM1O43490 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.75□□□□□ -1.49
PROM1O43490 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.75□□□□□ -1.49
PROM1O43490 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PROM1O43490 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.75□□□□□ -1.49
PROM1O43490 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.75□□□□□ -1.49
PROM1O43490 AC012146.2-201ENST00000576545 416 ntBASIC5.75□□□□□ -1.49
PROM1O43490 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.75□□□□□ -1.49
PROM1O43490 GLYATL1P2-202ENST00000588046 902 ntBASIC5.75□□□□□ -1.49
PROM1O43490 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.75□□□□□ -1.49
PROM1O43490 VN1R78P-201ENST00000597393 564 ntBASIC5.75□□□□□ -1.49
PROM1O43490 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.75□□□□□ -1.49
PROM1O43490 AC091057.2-201ENST00000602594 792 ntBASIC5.75□□□□□ -1.49
PROM1O43490 AC124916.2-201ENST00000604416 224 ntBASIC5.75□□□□□ -1.49
PROM1O43490 AC012557.2-201ENST00000605919 418 ntBASIC5.75□□□□□ -1.49
PROM1O43490 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PROM1O43490 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PROM1O43490 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.75□□□□□ -1.49
PROM1O43490 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PROM1O43490 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
PROM1O43490 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PROM1O43490 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PROM1O43490 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PROM1O43490 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.75□□□□□ -1.49
PROM1O43490 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.75□□□□□ -1.49
PROM1O43490 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PROM1O43490 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.75□□□□□ -1.49
PROM1O43490 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.75□□□□□ -1.49
PROM1O43490 AC003985.2-201ENST00000562268 1669 ntBASIC5.75□□□□□ -1.49
PROM1O43490 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PROM1O43490 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PROM1O43490 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PROM1O43490 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.75□□□□□ -1.49
PROM1O43490 AL513185.3-201ENST00000433335 1300 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AC008432.1-201ENST00000615912 1320 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.74□□□□□ -1.49
PROM1O43490 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
PROM1O43490 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.74□□□□□ -1.49
PROM1O43490 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.74□□□□□ -1.49
PROM1O43490 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.74□□□□□ -1.49
PROM1O43490 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PROM1O43490 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PROM1O43490 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PROM1O43490 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PROM1O43490 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.74□□□□□ -1.49
PROM1O43490 RNU1-134P-201ENST00000362935 165 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.74□□□□□ -1.49
PROM1O43490 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PROM1O43490 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PROM1O43490 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PROM1O43490 AP002784.2-201ENST00000397300 549 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AL603865.2-201ENST00000401679 213 ntBASIC5.74□□□□□ -1.49
PROM1O43490 UBE2V1P11-201ENST00000411559 285 ntBASIC5.74□□□□□ -1.49
PROM1O43490 RPS7P8-201ENST00000418311 581 ntBASIC5.74□□□□□ -1.49
PROM1O43490 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PROM1O43490 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PROM1O43490 BX119904.4-201ENST00000424402 301 ntBASIC5.74□□□□□ -1.49
PROM1O43490 RPL12P12-201ENST00000424633 501 ntBASIC5.74□□□□□ -1.49
PROM1O43490 MGAT2P2-201ENST00000427194 797 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.74□□□□□ -1.49
PROM1O43490 AL731534.1-201ENST00000434711 269 ntBASIC5.74□□□□□ -1.49
PROM1O43490 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.74□□□□□ -1.49
PROM1O43490 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PROM1O43490 RPL6P30-201ENST00000443382 862 ntBASIC5.74□□□□□ -1.49
PROM1O43490 RAB28P3-201ENST00000448325 597 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.74□□□□□ -1.49
PROM1O43490 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PROM1O43490 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.74□□□□□ -1.49
PROM1O43490 AL445687.2-201ENST00000458156 728 ntBASIC5.74□□□□□ -1.49
PROM1O43490 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.74□□□□□ -1.49
PROM1O43490 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.74□□□□□ -1.49
PROM1O43490 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.74□□□□□ -1.49
PROM1O43490 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.74□□□□□ -1.49
PROM1O43490 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.74□□□□□ -1.49
PROM1O43490 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PROM1O43490 AC010486.3-201ENST00000511602 785 ntBASIC5.74□□□□□ -1.49
PROM1O43490 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms