Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.69□□□□□ -1.5
O00370 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
O00370 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
O00370 GVINP1-202ENST00000531871 7271 ntBASIC5.69□□□□□ -1.5
O00370 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
O00370 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
O00370 AL672167.2-201ENST00000377164 879 ntBASIC5.69□□□□□ -1.5
O00370 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
O00370 AC005522.1-201ENST00000395416 346 ntBASIC5.69□□□□□ -1.5
O00370 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
O00370 RNA5SP487-201ENST00000410186 122 ntBASIC5.69□□□□□ -1.5
O00370 RN7SKP59-201ENST00000410520 314 ntBASIC5.69□□□□□ -1.5
O00370 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
O00370 OR52E3P-201ENST00000452083 936 ntBASIC5.69□□□□□ -1.5
O00370 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.69□□□□□ -1.5
O00370 AL133445.1-201ENST00000467051 452 ntBASIC5.69□□□□□ -1.5
O00370 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
O00370 SIAH1P1-201ENST00000479411 923 ntBASIC5.69□□□□□ -1.5
O00370 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
O00370 AC023424.1-201ENST00000496058 459 ntBASIC5.69□□□□□ -1.5
O00370 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.69□□□□□ -1.5
O00370 AC147055.1-201ENST00000509261 750 ntBASIC5.69□□□□□ -1.5
O00370 AC021193.1-201ENST00000511607 420 ntBASIC5.69□□□□□ -1.5
O00370 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.69□□□□□ -1.5
O00370 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.69□□□□□ -1.5
O00370 HMGN1P9-201ENST00000515212 298 ntBASIC5.69□□□□□ -1.5
O00370 SNORA48.9-201ENST00000516419 162 ntBASIC5.69□□□□□ -1.5
O00370 AC092709.1-201ENST00000521355 1045 ntBASIC5.69□□□□□ -1.5
O00370 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.69□□□□□ -1.5
O00370 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
O00370 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.69□□□□□ -1.5
O00370 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.69□□□□□ -1.5
O00370 AP000919.1-201ENST00000582850 985 ntBASIC5.69□□□□□ -1.5
O00370 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.69□□□□□ -1.5
O00370 AC009303.3-201ENST00000591103 736 ntBASIC5.69□□□□□ -1.5
O00370 FKBP1AP1-201ENST00000594588 318 ntBASIC5.69□□□□□ -1.5
O00370 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
O00370 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.69□□□□□ -1.5
O00370 AP003400.3-201ENST00000624904 346 ntBASIC5.69□□□□□ -1.5
O00370 AC136428.4-201ENST00000634254 1155 ntBASIC5.69□□□□□ -1.5
O00370 SAMMSON-227ENST00000642114 1199 ntBASIC5.69□□□□□ -1.5
O00370 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.69□□□□□ -1.5
O00370 AC112255.1-201ENST00000624070 2493 ntBASIC5.69□□□□□ -1.5
O00370 AL360270.2-201ENST00000562952 5985 ntBASIC5.69□□□□□ -1.5
O00370 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
O00370 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
O00370 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.68□□□□□ -1.5
O00370 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
O00370 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
O00370 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
O00370 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
O00370 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.68□□□□□ -1.5
O00370 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
O00370 RN7SKP162-201ENST00000363605 345 ntBASIC5.68□□□□□ -1.5
O00370 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
O00370 NPM1P4-201ENST00000414095 812 ntBASIC5.68□□□□□ -1.5
O00370 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.68□□□□□ -1.5
O00370 VN1R31P-201ENST00000417498 730 ntBASIC5.68□□□□□ -1.5
O00370 AL133325.1-201ENST00000421090 382 ntBASIC5.68□□□□□ -1.5
O00370 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
O00370 AC017019.1-201ENST00000426129 261 ntBASIC5.68□□□□□ -1.5
O00370 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.68□□□□□ -1.5
O00370 CFL1P1-202ENST00000432948 411 ntBASIC5.68□□□□□ -1.5
O00370 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.68□□□□□ -1.5
O00370 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.68□□□□□ -1.5
O00370 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.68□□□□□ -1.5
O00370 OR52Y1P-201ENST00000452418 828 ntBASIC5.68□□□□□ -1.5
O00370 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.68□□□□□ -1.5
O00370 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.68□□□□□ -1.5
O00370 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.68□□□□□ -1.5
O00370 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.68□□□□□ -1.5
O00370 YWHABP2-201ENST00000540201 713 ntBASIC5.68□□□□□ -1.5
O00370 RPL10P14-201ENST00000565265 298 ntBASIC5.68□□□□□ -1.5
O00370 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
O00370 MIR3176-201ENST00000582210 90 ntBASIC5.68□□□□□ -1.5
O00370 IMMP1LP3-201ENST00000604197 224 ntBASIC5.68□□□□□ -1.5
O00370 WBP1LP8-201ENST00000617401 327 ntBASIC5.68□□□□□ -1.5
O00370 AL391597.1-201ENST00000618707 694 ntBASIC5.68□□□□□ -1.5
O00370 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.68□□□□□ -1.5
O00370 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.68□□□□□ -1.5
O00370 SAMMSON-209ENST00000641222 1100 ntBASIC5.68□□□□□ -1.5
O00370 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
O00370 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
O00370 ADAM5-202ENST00000399789 1942 ntBASIC5.68□□□□□ -1.5
O00370 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
O00370 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.67□□□□□ -1.5
O00370 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
O00370 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.67□□□□□ -1.5
O00370 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
O00370 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
O00370 AL034549.2-201ENST00000618285 3373 ntBASIC5.67□□□□□ -1.5
O00370 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
O00370 RNA5SP241-201ENST00000391326 114 ntBASIC5.67□□□□□ -1.5
O00370 AL391361.1-201ENST00000405580 489 ntBASIC5.67□□□□□ -1.5
O00370 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
O00370 RPL12P18-201ENST00000437175 325 ntBASIC5.67□□□□□ -1.5
O00370 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.67□□□□□ -1.5
O00370 NPM1P19-201ENST00000450070 712 ntBASIC5.67□□□□□ -1.5
O00370 MTND3P6-201ENST00000485242 339 ntBASIC5.67□□□□□ -1.5
O00370 RN7SL423P-201ENST00000486202 304 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms