Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC28A1O00337 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC28A1O00337 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC28A1O00337 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SLC28A1O00337 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC28A1O00337 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC28A1O00337 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC28A1O00337 AC011755.1-201ENST00000623763 2049 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 AC107021.2-201ENST00000567714 2095 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC28A1O00337 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC28A1O00337 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC28A1O00337 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC28A1O00337 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC28A1O00337 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC28A1O00337 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SLC28A1O00337 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC28A1O00337 SNORA16A-201ENST00000384342 137 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 RNA5SP122-201ENST00000384457 108 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 RN7SKP240-201ENST00000410583 375 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 OR6E1P-201ENST00000414424 923 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 AC007064.3-201ENST00000422608 359 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 NPM1P26-201ENST00000426339 738 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC28A1O00337 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.14□□□□□ -1.59
SLC28A1O00337 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC28A1O00337 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC28A1O00337 GAPDHP25-201ENST00000447061 1001 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC28A1O00337 AL035090.1-201ENST00000454835 332 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC28A1O00337 AC079168.1-201ENST00000458741 345 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC28A1O00337 RPL7P41-201ENST00000485823 957 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SLC28A1O00337 PSMA2P2-201ENST00000504319 686 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 ENPP7P11-201ENST00000505915 627 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC28A1O00337 AC138866.2-201ENST00000508650 584 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC28A1O00337 AC008147.3-201ENST00000548666 354 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC28A1O00337 AC005252.1-201ENST00000604518 1063 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 CU639417.4-201ENST00000623928 207 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC28A1O00337 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC28A1O00337 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC28A1O00337 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SLC28A1O00337 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC28A1O00337 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC28A1O00337 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.14□□□□□ -1.59
SLC28A1O00337 AC023421.1-201ENST00000590535 1785 ntBASIC5.14□□□□□ -1.59
SLC28A1O00337 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC28A1O00337 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC28A1O00337 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC28A1O00337 AC020633.1-201ENST00000468439 2247 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC28A1O00337 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC28A1O00337 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC28A1O00337 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC28A1O00337 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC28A1O00337 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
SLC28A1O00337 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SLC28A1O00337 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC28A1O00337 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SLC28A1O00337 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC28A1O00337 RNU6-729P-201ENST00000384399 107 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 RNA5SP105-201ENST00000391123 113 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 HSPA8P15-201ENST00000401676 786 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 LYPLA1P3-201ENST00000402650 695 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 AC013470.3-201ENST00000420252 1194 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC28A1O00337 TNPO1P1-201ENST00000423641 1138 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC28A1O00337 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC28A1O00337 AC002504.1-201ENST00000438281 691 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 TCEA1P3-201ENST00000443005 880 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC28A1O00337 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.13□□□□□ -1.59
SLC28A1O00337 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC28A1O00337 SEPT7P3-201ENST00000455017 621 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 RN7SL423P-201ENST00000486202 304 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.13□□□□□ -1.59
SLC28A1O00337 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC28A1O00337 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.13□□□□□ -1.59
SLC28A1O00337 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC28A1O00337 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC28A1O00337 AC100784.1-201ENST00000522790 310 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 IGKV2-4-201ENST00000523070 340 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC28A1O00337 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC28A1O00337 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC28A1O00337 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC28A1O00337 AC006349.1-201ENST00000555526 235 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC28A1O00337 AC107958.1-201ENST00000556576 290 ntBASIC5.13□□□□□ -1.59
SLC28A1O00337 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC28A1O00337 AC010547.6-201ENST00000571789 193 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms