Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RNU6-599P-201ENST00000459383 107 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 RNU6-1193P-201ENST00000459461 107 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC188H7C350 PCNAP1-201ENST00000505363 709 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC188H7C350 AC114781.3-201ENST00000512083 142 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 AC027369.2-201ENST00000528030 440 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC188H7C350 AC005341.1-201ENST00000571086 708 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 AC011840.5-201ENST00000582125 771 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC188H7C350 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC188H7C350 AL162431.4-201ENST00000604674 411 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 AC239803.2-201ENST00000610161 430 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 RMST_5.1-201ENST00000618704 126 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC188H7C350 AL133370.2-201ENST00000619934 439 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 RNU6-368P-201ENST00000620928 107 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 RNU6-538P-201ENST00000622329 107 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC188H7C350 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CCDC188H7C350 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC188H7C350 AC090181.3-201ENST00000624777 1514 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC188H7C350 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC188H7C350 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC188H7C350 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CCDC188H7C350 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC188H7C350 AL353796.1-201ENST00000561542 3241 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC188H7C350 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC188H7C350 Z95331.1-201ENST00000623075 23112 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC188H7C350 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC188H7C350 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC188H7C350 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC188H7C350 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC188H7C350 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CCDC188H7C350 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC188H7C350 AC114786.1-201ENST00000512892 1415 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC188H7C350 AL731566.1-201ENST00000620490 1937 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCDC188H7C350 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC188H7C350 RNA5SP232-201ENST00000364144 119 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 RNA5SP394-201ENST00000364216 119 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC188H7C350 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC188H7C350 AC106901.1-201ENST00000425086 698 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC188H7C350 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC188H7C350 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC188H7C350 AL138899.2-201ENST00000439139 499 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 TXNP2-201ENST00000443918 295 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC188H7C350 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC188H7C350 RPS4XP12-201ENST00000461747 709 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 AC058823.1-201ENST00000485315 474 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 OR11I1P-201ENST00000486033 954 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC188H7C350 AC122718.2-201ENST00000505325 591 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 UGT2A3P7-201ENST00000510485 734 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC188H7C350 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC188H7C350 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC188H7C350 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC188H7C350 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC188H7C350 RN7SL708P-201ENST00000580952 299 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 AC005726.4-201ENST00000582858 458 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC188H7C350 AC073111.2-201ENST00000605657 1075 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC188H7C350 AC012467.1-201ENST00000607740 256 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC188H7C350 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC188H7C350 AL118522.2-201ENST00000616045 615 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC188H7C350 AC129915.3-201ENST00000634128 948 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 AC103703.1-201ENST00000634783 663 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC188H7C350 AC119674.1-220ENST00000641502 1048 ntBASIC5.51□□□□□ -1.53
CCDC188H7C350 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC188H7C350 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CCDC188H7C350 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC188H7C350 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC188H7C350 SMG1P4-204ENST00000523028 4131 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CCDC188H7C350 AC068870.3-201ENST00000625077 2536 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCDC188H7C350 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC188H7C350 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC188H7C350 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC188H7C350 AC020633.1-201ENST00000468439 2247 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC188H7C350 RNU6-1251P-201ENST00000364502 107 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CCDC188H7C350 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC188H7C350 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC188H7C350 RNU6-152P-201ENST00000384037 107 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms