Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 OR8G3P-201ENST00000533406 921 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 RBM22P12-201ENST00000567098 1255 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 AC009852.2-201ENST00000567898 485 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 PPATP2-201ENST00000605635 508 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 AL139407.1-201ENST00000613826 1175 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 FRG1EP-201ENST00000634469 770 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 AC073869.8-201ENST00000641806 335 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RHBDD3Q9Y3P4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.65
RHBDD3Q9Y3P4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.71□□□□□ -1.65
RHBDD3Q9Y3P4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
RHBDD3Q9Y3P4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RHBDD3Q9Y3P4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 PCAT14-202ENST00000627127 3935 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 RNA5SP46-201ENST00000362370 120 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 RNU4-44P-201ENST00000363050 141 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 RN7SKP292-201ENST00000365522 317 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 BMS1P3-201ENST00000372011 932 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 RNU1-74P-201ENST00000384108 171 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 RNA5SP284-201ENST00000384547 118 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 SNORA48.4-201ENST00000391089 134 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 SNORA68.2-201ENST00000391263 128 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 KCTD9P1-201ENST00000430462 1167 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 FMO7P-201ENST00000436045 768 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AL138899.2-201ENST00000439139 499 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AC073109.1-201ENST00000445066 978 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AC007998.1-201ENST00000474156 672 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 EIF3KP3-201ENST00000514461 639 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 HMGN1P9-201ENST00000515212 298 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AP002373.2-201ENST00000541631 1060 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 LSM3P2-201ENST00000551246 273 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AL049872.1-201ENST00000556323 322 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 NDUFA5P11-201ENST00000567995 343 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AC096553.1-201ENST00000605169 829 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 SNORA35B-201ENST00000607417 129 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AC004241.3-201ENST00000611728 517 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 MIR6778-201ENST00000617912 73 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 uc_338.7-201ENST00000621834 124 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 OR8A1-204ENST00000642111 1145 ntBASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.71□□□□□ -1.66
RHBDD3Q9Y3P4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms