Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC091305.2-201ENST00000624049 1576 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AC139713.2-215ENST00000641428 5037 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 OR14L1P-202ENST00000641545 3009 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 OR9G4-201ENST00000302957 984 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 RNFT1P3-201ENST00000340898 1052 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 SNORA51.9-201ENST00000384295 124 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 MT-RNR1-201ENST00000389680 954 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 MARK2P12-201ENST00000420129 585 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 BX284632.2-201ENST00000421091 399 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 ARAFP1-201ENST00000422172 605 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 RPL12P17-201ENST00000432393 498 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 ATP5LP2-201ENST00000440646 311 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AL512605.1-202ENST00000441919 381 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AL359955.2-201ENST00000445380 353 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AC004890.1-201ENST00000461005 181 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 HMGN1P8-201ENST00000463578 288 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AC022215.1-201ENST00000481770 362 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AP006245.2-201ENST00000522004 300 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 BNIP3P1-201ENST00000547295 580 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AC007956.1-201ENST00000555623 542 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 MTND2P13-201ENST00000577438 1039 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 RN7SL435P-201ENST00000584418 282 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AC009027.1-201ENST00000604510 479 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AC108673.3-201ENST00000609183 335 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AP005431.1-201ENST00000618479 319 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AC022106.2-201ENST00000620114 757 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AP003400.3-201ENST00000624904 346 ntBASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
KCNIP3Q9Y2W7 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 RN7SKP224-201ENST00000364140 325 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 RNA5SP105-201ENST00000391123 113 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms