Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF6Q9Y252 LDHBP2-201ENST00000456969 1005 ntBASIC5.1□□□□□ -1.59
RNF6Q9Y252 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF6Q9Y252 AC074255.1-201ENST00000511259 501 ntBASIC5.1□□□□□ -1.59
RNF6Q9Y252 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF6Q9Y252 PMS2P3-207ENST00000529061 717 ntBASIC5.1□□□□□ -1.59
RNF6Q9Y252 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF6Q9Y252 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF6Q9Y252 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
RNF6Q9Y252 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF6Q9Y252 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.1□□□□□ -1.59
RNF6Q9Y252 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF6Q9Y252 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF6Q9Y252 AC127024.5-201ENST00000580085 462 ntBASIC5.1□□□□□ -1.59
RNF6Q9Y252 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF6Q9Y252 BNIP3P32-201ENST00000600015 554 ntBASIC5.1□□□□□ -1.59
RNF6Q9Y252 AL356608.1-201ENST00000610034 820 ntBASIC5.1□□□□□ -1.59
RNF6Q9Y252 AL359513.1-201ENST00000614364 557 ntBASIC5.1□□□□□ -1.59
RNF6Q9Y252 MIR8080-201ENST00000622224 89 ntBASIC5.1□□□□□ -1.59
RNF6Q9Y252 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF6Q9Y252 SAMMSON-227ENST00000642114 1199 ntBASIC5.1□□□□□ -1.59
RNF6Q9Y252 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RNF6Q9Y252 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF6Q9Y252 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RNF6Q9Y252 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF6Q9Y252 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF6Q9Y252 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RNF6Q9Y252 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF6Q9Y252 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF6Q9Y252 AC100757.1-201ENST00000616872 1835 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF6Q9Y252 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 RNA5SP131-201ENST00000365452 119 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 SNORA70-201ENST00000384436 135 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 PPIAP9-201ENST00000403866 498 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 AC234781.4-201ENST00000419384 244 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 AL133173.1-201ENST00000423458 397 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF6Q9Y252 RPL7P56-201ENST00000429441 717 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 PTMAP6-201ENST00000439110 327 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF6Q9Y252 IGBP1P3-201ENST00000447449 1000 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 RANP1-206ENST00000455094 651 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 OR7L1P-201ENST00000456181 380 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 RPS3AP15-201ENST00000483874 781 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 RN7SL30P-201ENST00000488416 306 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 AC006499.3-201ENST00000506077 748 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 RNA5SP92-201ENST00000516437 110 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 AC004825.1-201ENST00000555068 586 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 AC011270.1-201ENST00000558606 583 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 AC063977.5-201ENST00000601044 974 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 AC108738.1-201ENST00000603703 237 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF6Q9Y252 AC008115.4-201ENST00000619780 775 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 MIR6837-201ENST00000620884 64 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 AC243960.7-201ENST00000623532 707 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 CASC19-264ENST00000641912 1184 ntBASIC5.09□□□□□ -1.59
RNF6Q9Y252 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF6Q9Y252 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF6Q9Y252 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF6Q9Y252 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
RNF6Q9Y252 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.09□□□□□ -1.6
RNF6Q9Y252 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
RNF6Q9Y252 PWAR1-201ENST00000624188 2414 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC104623.2-202ENST00000623477 4002 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF6Q9Y252 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF6Q9Y252 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF6Q9Y252 RNA5SP319-201ENST00000362768 119 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF6Q9Y252 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms