Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 ZNF812P-201ENST00000457674 1694 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC012078.1-201ENST00000405035 1646 ntBASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC8.31□□□□□ -1.08
ZC3H4Q9UPT8 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 RNU5A-6P-201ENST00000384136 116 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 ATP5HP3-201ENST00000396994 486 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 LINC01347-201ENST00000417964 355 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 RPS26P13-201ENST00000419030 330 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 AL139413.1-201ENST00000421309 217 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 FAM96AP1-201ENST00000430879 482 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 SDHCP3-201ENST00000445371 506 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 Z99127.3-201ENST00000448158 395 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 RPL23AP35-201ENST00000451906 501 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 AC068228.1-201ENST00000461723 211 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 KLF3P2-201ENST00000465138 268 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 RPL9P6-201ENST00000492764 598 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 TRIM77BP-201ENST00000524985 1119 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 ACTG1P15-201ENST00000570019 1063 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 MIR4528-201ENST00000577763 90 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 SYPL1P2-201ENST00000582878 727 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 AL390816.3-201ENST00000604527 1066 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 UGT2B25P-201ENST00000511504 1586 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 AC005614.1-201ENST00000598952 3653 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 OFD1P10Y-201ENST00000434110 1433 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 RARSP1-201ENST00000542842 1418 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 AL157700.1-201ENST00000561973 1432 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 KCNMB3P1-202ENST00000493696 3389 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 AC116158.1-201ENST00000560231 2129 ntBASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
ZC3H4Q9UPT8 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 PPIAP24-201ENST00000328558 471 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 RNU6-876P-201ENST00000391295 104 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 SNX10-203ENST00000409367 746 ntTSL 5 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 YWHAEP5-201ENST00000431545 765 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms