Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 SNORA68-201ENST00000384437 133 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 CNN3P1-201ENST00000401596 935 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 RNU6-1068P-201ENST00000410958 103 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 PTPN2P1-201ENST00000423212 1072 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 ELOBP4-201ENST00000423418 296 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 CR391992.1-201ENST00000438601 394 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 MTND1P12-201ENST00000455231 147 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 AC135721.2-201ENST00000464237 300 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 AF305872.1-201ENST00000485217 471 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 RNU6-943P-201ENST00000516960 98 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 ATP5J2P4-201ENST00000538774 267 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 RPL21P5-201ENST00000554662 472 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 AL390838.2-201ENST00000602394 274 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 MTCO2P22-201ENST00000603246 681 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 BX323046.1-201ENST00000610145 535 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 AC025162.2-201ENST00000619602 560 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 RMST_9.1-201ENST00000619945 193 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 AC018558.4-201ENST00000622153 281 ntBASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
TRIM35Q9UPQ4 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AC021242.1-201ENST00000507315 2035 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 RNA5SP238-201ENST00000365464 120 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 RNU6-723P-201ENST00000383973 107 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 RPL7P58-201ENST00000402913 758 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AL593856.1-201ENST00000419949 805 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 SEPT7P5-201ENST00000434048 306 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 ATP5LP4-201ENST00000434169 307 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 RPL7L1P11-201ENST00000446092 721 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AC012512.1-201ENST00000446594 718 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AL590365.1-201ENST00000450788 243 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AC096922.1-201ENST00000461635 651 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 MRPL49P1-201ENST00000505951 535 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AC093303.1-201ENST00000514549 295 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 RNU4-49P-201ENST00000516080 140 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 TPRXL-211ENST00000532880 754 ntTSL 2 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AL049869.4-201ENST00000555669 178 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AC026898.1-201ENST00000586404 571 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 RPS11-203ENST00000596873 583 ntTSL 2 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 PRELID3BP8-201ENST00000604148 295 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 MIR7162-201ENST00000611134 69 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AL355810.1-201ENST00000614629 552 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AC104010.1-201ENST00000616889 150 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AP006248.2-201ENST00000623309 592 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 DLST-216ENST00000626051 252 ntTSL 5 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 AC131392.2-201ENST00000505635 4332 ntBASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM35Q9UPQ4 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms