Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TMEM248Q9NWD8 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TMEM248Q9NWD8 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TMEM248Q9NWD8 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TMEM248Q9NWD8 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TMEM248Q9NWD8 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TMEM248Q9NWD8 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AC112255.1-201ENST00000624070 2493 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 Z95114.1-201ENST00000624264 14574 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 MIR143-201ENST00000385300 106 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 ATP5F1P6-201ENST00000402768 767 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 NACAP7-201ENST00000407371 609 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 RN7SKP206-201ENST00000410823 293 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AC069282.1-201ENST00000411911 526 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 RPSAP35-201ENST00000413753 818 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 SFR1P2-201ENST00000421841 730 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 RPL7P56-201ENST00000429441 717 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 PTP4A1P3-201ENST00000433661 420 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AC012075.1-201ENST00000436549 580 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 IGBP1P3-201ENST00000447449 1000 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AL627224.1-201ENST00000448334 444 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 OR8Q1P-201ENST00000526467 655 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AC125494.2-201ENST00000602431 657 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 RPAP2P1-201ENST00000603626 1168 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AF129408.1-201ENST00000608767 431 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AC005156.1-201ENST00000613371 573 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AP001153.1-201ENST00000641024 338 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 AC114774.1-201ENST00000507410 1770 ntBASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.67□□□□□ -1.5
TMEM248Q9NWD8 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 OR4K17-201ENST00000315543 1032 ntBASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 RNA5SP234-201ENST00000363916 119 ntBASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 CBX1P3-201ENST00000413296 527 ntBASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.66□□□□□ -1.5
TMEM248Q9NWD8 AL513325.1-201ENST00000417716 1034 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms