Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 OR10J6P-201ENST00000289731 930 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 FGF7P2-201ENST00000332473 296 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 AL360271.1-201ENST00000395679 510 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 AL512353.3-201ENST00000417517 1326 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 HSPD1P9-201ENST00000420325 1636 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 AL353743.4-201ENST00000422653 1547 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 AC002542.1-201ENST00000440683 193 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 GOT2P1-201ENST00000440922 1309 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 MTCO2P25-201ENST00000447065 681 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 CDY11P-201ENST00000447168 1651 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 CTSLP6-201ENST00000458273 1002 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 OR9M1P-201ENST00000459641 921 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 RPL5P24-201ENST00000463742 885 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 RN7SL149P-201ENST00000465197 281 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 RN7SL228P-201ENST00000470060 303 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 RN7SL518P-201ENST00000491887 280 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 NPM1P27-201ENST00000502784 830 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 FAM92A1P2-202ENST00000504766 877 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 OR7K1P-201ENST00000546439 926 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 DPPA2P4-201ENST00000563717 878 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 MIR4528-201ENST00000577763 90 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 AC092032.1-201ENST00000603090 165 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 AC012150.2-201ENST00000621300 544 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 DUXAP9-208ENST00000622815 614 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 AC105235.1-201ENST00000623208 1816 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 OR5G5P-204ENST00000627642 621 ntBASIC6.63□□□□□ -1.35
SSU72Q9NP77 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSU72Q9NP77 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.63□□□□□ -1.35
SSU72Q9NP77 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 MTND5P26-201ENST00000426018 1752 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 Z95114.1-201ENST00000624264 14574 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC010132.4-201ENST00000569883 1368 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 RPL17P50-201ENST00000396131 546 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 AL034372.1-201ENST00000407586 754 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 RN7SKP296-201ENST00000411185 341 ntBASIC6.62□□□□□ -1.35
SSU72Q9NP77 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSU72Q9NP77 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.62□□□□□ -1.35
SSU72Q9NP77 TPT1P2-201ENST00000413105 503 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms