Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 RNA5SP140-201ENST00000364524 92 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 SNORA70.9-201ENST00000384370 135 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 SNORD65C-201ENST00000390962 71 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 SNORD65-201ENST00000391079 73 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AL031577.2-201ENST00000404133 280 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AL033519.1-201ENST00000407266 307 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 RNU2-16P-201ENST00000410712 136 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 RN7SKP166-201ENST00000410812 305 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 PGBD4P8-201ENST00000412993 562 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 RANP6-201ENST00000413691 644 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AL139415.2-201ENST00000431968 163 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC092106.2-201ENST00000436597 487 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 EMC3-AS1-205ENST00000438698 534 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 GAPDHP33-201ENST00000443168 1013 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC092601.1-201ENST00000444526 383 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AKR1D1P1-201ENST00000457236 936 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 RPL30P6-201ENST00000475925 342 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 MTAPP1-201ENST00000489154 819 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC022206.1-201ENST00000495947 347 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 NPM1P27-201ENST00000502784 830 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC091965.3-201ENST00000506236 208 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 OR4A6P-201ENST00000534364 970 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC012435.1-202ENST00000568772 240 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AL353621.2-201ENST00000605340 133 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC093635.1-201ENST00000609028 555 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC138749.5-201ENST00000611461 208 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC015922.4-201ENST00000612568 690 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AL138960.1-201ENST00000613838 513 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AL359314.1-201ENST00000616913 261 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AL356266.1-201ENST00000623311 483 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC018692.2-201ENST00000624130 348 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AL132640.3-201ENST00000630473 177 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AL121936.2-201ENST00000641935 662 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AL078595.2-201ENST00000605309 1780 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 PPIAP24-201ENST00000328558 471 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 RNU1-87P-201ENST00000363727 170 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 Y_RNA.359-201ENST00000365498 102 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 U3.52-201ENST00000384034 216 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 RNY3P14-201ENST00000384309 102 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 SNORD94-201ENST00000386037 137 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms