Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC135628.1-201ENST00000568867 534 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 EIF4A3P1-201ENST00000578499 647 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC022069.1-201ENST00000582910 658 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC106791.2-201ENST00000604680 391 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC004241.2-201ENST00000614562 444 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 U1.41-201ENST00000617626 165 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC015726.3-201ENST00000624501 418 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC018628.1-201ENST00000624147 3819 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AL359263.1-201ENST00000441188 2796 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC010624.4-201ENST00000597606 1351 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AL161901.1-201ENST00000624954 3425 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 MAPK10-261ENST00000641050 3109 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 HMGB1P5-201ENST00000255320 642 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 RNA5SP350-201ENST00000363298 111 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 BMS1P3-201ENST00000372011 932 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 MIR621-201ENST00000384919 96 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AL079341.1-201ENST00000404701 1207 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AL049697.3-201ENST00000406493 982 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 NRBF2P2-201ENST00000413087 861 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AL139421.1-201ENST00000423010 169 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 MTCO1P54-201ENST00000430139 712 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AL138899.2-201ENST00000439139 499 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 RPS7P5-201ENST00000441482 581 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AL031681.1-201ENST00000443304 400 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 TPTE2P6-202ENST00000445572 1007 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC099670.1-201ENST00000455141 783 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 RN7SKP198-201ENST00000459286 306 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 MARK2P8-201ENST00000476069 952 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 RN7SL70P-201ENST00000478322 302 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 RN7SL143P-201ENST00000496780 297 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 NPM1P27-201ENST00000502784 830 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 DYNLL1P6-201ENST00000503440 264 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC114324.2-202ENST00000503812 134 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC021146.8-201ENST00000507455 733 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 CDC42P3-201ENST00000518493 633 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC018442.3-201ENST00000523025 183 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 CASC16-202ENST00000563844 610 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC106785.4-201ENST00000569492 412 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 LINC00556-201ENST00000569603 412 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 MIR378C-201ENST00000578683 81 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 BPTFP1-201ENST00000579209 492 ntBASIC6.57□□□□□ -1.36
TRIM55Q9BYV6 AC090312.2-201ENST00000582687 378 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms