Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM54Q9BYV2 AL357562.1-201ENST00000624911 609 ntBASIC5.85□□□□□ -1.47
TRIM54Q9BYV2 AC073488.3-201ENST00000631611 778 ntBASIC5.85□□□□□ -1.47
TRIM54Q9BYV2 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM54Q9BYV2 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM54Q9BYV2 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM54Q9BYV2 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM54Q9BYV2 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM54Q9BYV2 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
TRIM54Q9BYV2 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
TRIM54Q9BYV2 UGT2B26P-201ENST00000508672 1613 ntBASIC5.85□□□□□ -1.47
TRIM54Q9BYV2 AC012254.3-201ENST00000591183 2117 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 TAS2R15P-201ENST00000390674 928 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 GCNT1P4-201ENST00000404096 329 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AL354868.1-201ENST00000417077 482 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 LINC01347-201ENST00000417964 355 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 EEF1B2P3-201ENST00000447718 678 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AC092155.2-201ENST00000454675 477 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 GTF2IP12-201ENST00000456547 356 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 RNU1-88P-201ENST00000459274 128 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AL603882.1-201ENST00000463059 681 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 PFN1P6-201ENST00000476786 399 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AC021006.1-201ENST00000489849 553 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AC073610.1-201ENST00000489971 396 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AC106822.1-201ENST00000502647 526 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 OR7E99P-201ENST00000505750 922 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AC091874.2-201ENST00000505889 720 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 TOMM22P4-201ENST00000511318 336 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 MIR4502-201ENST00000580432 81 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AC134669.1-201ENST00000581275 672 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 PART1_2.1-201ENST00000612397 250 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AL445670.1-201ENST00000618889 801 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 SNX18P12-201ENST00000624821 759 ntBASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM54Q9BYV2 MT-RNR2-201ENST00000387347 1559 ntBASIC5.84□□□□□ -1.48
TRIM54Q9BYV2 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
TRIM54Q9BYV2 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TRIM54Q9BYV2 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
TRIM54Q9BYV2 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.84□□□□□ -1.48
TRIM54Q9BYV2 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 RNA5SP110-201ENST00000362638 115 ntBASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 RNA5SP232-201ENST00000364144 119 ntBASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 RN7SKP128-201ENST00000364270 303 ntBASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 RNA5SP279-201ENST00000365513 117 ntBASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 RNA5SP211-201ENST00000365516 117 ntBASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM54Q9BYV2 GAPDHP15-201ENST00000398586 975 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms