Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VGLL1Q99990 AC068620.3-201ENST00000602749 560 ntBASIC4.28□□□□□ -1.72
VGLL1Q99990 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.28□□□□□ -1.72
VGLL1Q99990 AC005828.7-201ENST00000607331 556 ntBASIC4.28□□□□□ -1.72
VGLL1Q99990 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.28□□□□□ -1.72
VGLL1Q99990 MIR6809-201ENST00000612189 116 ntBASIC4.28□□□□□ -1.72
VGLL1Q99990 AL139407.1-201ENST00000613826 1175 ntBASIC4.28□□□□□ -1.72
VGLL1Q99990 AC073342.3-201ENST00000624211 193 ntBASIC4.28□□□□□ -1.72
VGLL1Q99990 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
VGLL1Q99990 CASC19-274ENST00000642018 970 ntBASIC4.28□□□□□ -1.72
VGLL1Q99990 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
VGLL1Q99990 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VGLL1Q99990 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.28□□□□□ -1.72
VGLL1Q99990 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.28□□□□□ -1.72
VGLL1Q99990 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
VGLL1Q99990 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VGLL1Q99990 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VGLL1Q99990 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VGLL1Q99990 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
VGLL1Q99990 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VGLL1Q99990 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VGLL1Q99990 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.28□□□□□ -1.72
VGLL1Q99990 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VGLL1Q99990 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VGLL1Q99990 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VGLL1Q99990 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VGLL1Q99990 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VGLL1Q99990 HSPD1P9-201ENST00000420325 1636 ntBASIC4.28□□□□□ -1.72
VGLL1Q99990 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
VGLL1Q99990 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
VGLL1Q99990 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.28□□□□□ -1.73
VGLL1Q99990 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
VGLL1Q99990 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VGLL1Q99990 AC009501.3-201ENST00000605001 1352 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VGLL1Q99990 AL353796.1-201ENST00000561542 3241 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
VGLL1Q99990 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VGLL1Q99990 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VGLL1Q99990 QRSL1P1-201ENST00000400977 1540 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VGLL1Q99990 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VGLL1Q99990 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VGLL1Q99990 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.27□□□□□ -1.73
VGLL1Q99990 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VGLL1Q99990 OR4F13P-202ENST00000560066 2054 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
VGLL1Q99990 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VGLL1Q99990 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VGLL1Q99990 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
VGLL1Q99990 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.27□□□□□ -1.73
VGLL1Q99990 SNORA51.9-201ENST00000384295 124 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VGLL1Q99990 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 AL024507.1-201ENST00000412741 274 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 NPM1P40-201ENST00000412758 733 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 AL357752.1-201ENST00000412817 349 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 AL354890.1-201ENST00000413730 346 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.27□□□□□ -1.73
VGLL1Q99990 NIFKP3-201ENST00000417799 865 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 AC106883.1-201ENST00000418805 562 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 AC092447.3-201ENST00000426027 686 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 TMEM183AP1-205ENST00000432739 290 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 AL512661.1-201ENST00000434586 1253 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 TUBB4BP6-201ENST00000437576 479 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 RAB9AP5-201ENST00000437794 597 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 AL645931.1-201ENST00000439737 410 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 RPL6P30-201ENST00000443382 862 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 RAB9AP2-201ENST00000443911 597 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.27□□□□□ -1.73
VGLL1Q99990 LINC02210-201ENST00000444561 288 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.27□□□□□ -1.73
VGLL1Q99990 MOB1AP2-201ENST00000446060 614 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.27□□□□□ -1.73
VGLL1Q99990 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.27□□□□□ -1.73
VGLL1Q99990 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.27□□□□□ -1.73
VGLL1Q99990 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.27□□□□□ -1.73
VGLL1Q99990 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VGLL1Q99990 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.27□□□□□ -1.73
VGLL1Q99990 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VGLL1Q99990 GAPDHP71-201ENST00000511530 1003 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VGLL1Q99990 RN7SKP238-201ENST00000516483 249 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 Y_RNA.717-201ENST00000517106 92 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 AC139365.2-201ENST00000517972 253 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 AP003355.1-201ENST00000518956 587 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.27□□□□□ -1.73
VGLL1Q99990 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.27□□□□□ -1.73
VGLL1Q99990 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.27□□□□□ -1.73
VGLL1Q99990 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.27□□□□□ -1.73
VGLL1Q99990 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.27□□□□□ -1.73
VGLL1Q99990 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VGLL1Q99990 AGGF1P7-201ENST00000562369 913 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 AC096996.1-201ENST00000563813 325 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 MIR3154-201ENST00000577829 84 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 MIR4776-2-201ENST00000580204 80 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.27□□□□□ -1.73
VGLL1Q99990 AC107993.1-201ENST00000591343 684 ntBASIC4.27□□□□□ -1.73
VGLL1Q99990 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms