Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 RPS26P13-201ENST00000419030 330 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX18Q96RF0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 KCTD9P1-201ENST00000430462 1167 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC073410.1-201ENST00000435125 589 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 GAPDHP59-201ENST00000435908 267 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 MTND2P40-201ENST00000436718 841 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 SETD6P1-201ENST00000444575 317 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 AL162739.1-201ENST00000450606 307 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 NDUFA5P9-201ENST00000472609 340 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 RPL23AP40-201ENST00000487630 390 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 RN7SL362P-201ENST00000494228 267 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX18Q96RF0 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC113420.1-201ENST00000507903 571 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC018797.1-201ENST00000510791 255 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 RNA5SP230-201ENST00000517039 122 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC005363.1-201ENST00000530779 351 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC084121.1-201ENST00000533882 835 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 TOMM20P1-201ENST00000534518 427 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX18Q96RF0 AL078601.3-201ENST00000573303 535 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 OR1E3-201ENST00000575608 948 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 PCNAP1-202ENST00000595299 752 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC008536.1-201ENST00000602872 669 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC008555.7-201ENST00000605008 583 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 AL035461.2-201ENST00000619201 524 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX18Q96RF0 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 AL034546.1-201ENST00000623740 3693 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX18Q96RF0 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX18Q96RF0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX18Q96RF0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX18Q96RF0 MFSD8-213ENST00000641134 1327 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX18Q96RF0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 CASC19-246ENST00000641625 1606 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNX18Q96RF0 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX18Q96RF0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX18Q96RF0 KARSP1-201ENST00000451871 1752 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX18Q96RF0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNX18Q96RF0 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 RNA5SP346-201ENST00000363541 121 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX18Q96RF0 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 LRRC37BP1-201ENST00000398851 714 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 OR7E156P-201ENST00000400303 464 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 RN7SKP97-201ENST00000410966 333 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC079809.1-201ENST00000415468 276 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 AL449283.1-202ENST00000418249 604 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 RPSAP65-201ENST00000429660 595 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 PSMD10P2-201ENST00000432890 672 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX18Q96RF0 Z84478.1-201ENST00000438230 1219 ntBASIC5.48□□□□□ -1.53
SNX18Q96RF0 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms