Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 RPSAP37-201ENST00000470913 821 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 RN7SL568P-201ENST00000493069 298 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 IGKV3D-25-201ENST00000519599 235 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 OR4A41P-201ENST00000533053 928 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 SMARCE1P3-201ENST00000553649 1231 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 OR1E3-201ENST00000575608 948 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 RPL26P30-202ENST00000602923 645 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AC022001.1-201ENST00000605193 268 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 OR7M1P-201ENST00000608946 533 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AP005431.1-201ENST00000618479 319 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 5S_rRNA.29-201ENST00000641250 107 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 CASC19-204ENST00000641001 2055 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AC093775.1-201ENST00000624154 1868 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 OR10J6P-201ENST00000289731 930 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 COX6B1P3-201ENST00000312310 260 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 SNORA64.1-201ENST00000362600 132 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 MIR191-201ENST00000384873 92 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 LSM5-203ENST00000409782 649 ntTSL 5 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 MARK2P12-201ENST00000420129 585 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 OR5M12P-201ENST00000423388 929 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AC124944.2-201ENST00000429866 1242 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 MTND6P18-201ENST00000439477 513 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 CST12P-201ENST00000457644 362 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AC093827.1-201ENST00000480094 861 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 MTND6P2-201ENST00000512226 524 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 SNORA70.20-201ENST00000516848 126 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 HMGB1P42-201ENST00000532126 553 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AC121758.1-202ENST00000556917 658 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 RN7SL356P-201ENST00000582228 248 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AC005828.7-201ENST00000607331 556 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 SNORD91B-202ENST00000608459 222 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AP001437.1-201ENST00000608783 456 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 MIR6721-201ENST00000617181 87 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AC087565.3-203ENST00000641018 837 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 LINC01963-201ENST00000562038 3148 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 OR14L1P-202ENST00000641545 3009 ntBASIC3.93□□□□□ -1.78
AP1S3Q96PC3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
AP1S3Q96PC3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms