Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 NANOGP4-201ENST00000427230 913 ntBASIC5.49□□□□□ -1.53
RPRD1AQ96P16 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 OR52B5P-201ENST00000435337 951 ntBASIC5.49□□□□□ -1.53
RPRD1AQ96P16 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 RN7SL214P-201ENST00000487317 265 ntBASIC5.49□□□□□ -1.53
RPRD1AQ96P16 IGBP1P4-201ENST00000503202 879 ntBASIC5.49□□□□□ -1.53
RPRD1AQ96P16 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 AP000859.1-201ENST00000525536 307 ntBASIC5.49□□□□□ -1.53
RPRD1AQ96P16 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 AC068993.1-201ENST00000546724 589 ntBASIC5.49□□□□□ -1.53
RPRD1AQ96P16 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.49□□□□□ -1.53
RPRD1AQ96P16 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 AP002505.2-201ENST00000623585 696 ntBASIC5.49□□□□□ -1.53
RPRD1AQ96P16 AP003400.3-201ENST00000624904 346 ntBASIC5.49□□□□□ -1.53
RPRD1AQ96P16 OR52B5P-202ENST00000641118 1110 ntBASIC5.49□□□□□ -1.53
RPRD1AQ96P16 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 AC003985.2-201ENST00000562268 1669 ntBASIC5.49□□□□□ -1.53
RPRD1AQ96P16 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RPRD1AQ96P16 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AC092111.2-201ENST00000611627 1414 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AL590763.1-201ENST00000398297 1545 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 SNORA5.1-201ENST00000384275 131 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AC007068.1-201ENST00000396690 844 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 MIR1178-201ENST00000408396 91 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 HSPE1P16-201ENST00000426640 348 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AC245047.2-201ENST00000441060 530 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 RPL5P25-201ENST00000441148 775 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AL163193.1-201ENST00000444895 788 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 VN1R96P-201ENST00000446052 858 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 FAR2P1-206ENST00000449736 709 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 RPL7P6-201ENST00000480903 738 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AC015864.1-201ENST00000496512 544 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AC010503.3-201ENST00000594355 540 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AC126915.2-201ENST00000610957 190 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AC009950.2-201ENST00000636548 183 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 SMG1P7-201ENST00000565246 2704 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AC079298.1-201ENST00000625026 1619 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 SAMMSON-213ENST00000641336 1521 ntBASIC5.48□□□□□ -1.53
RPRD1AQ96P16 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RPRD1AQ96P16 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
RPRD1AQ96P16 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RPRD1AQ96P16 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RPRD1AQ96P16 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RPRD1AQ96P16 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
RPRD1AQ96P16 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RPRD1AQ96P16 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.47□□□□□ -1.53
RPRD1AQ96P16 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RPRD1AQ96P16 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RPRD1AQ96P16 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RPRD1AQ96P16 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RPRD1AQ96P16 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.47□□□□□ -1.53
RPRD1AQ96P16 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RPRD1AQ96P16 U3.2-201ENST00000362981 210 ntBASIC5.47□□□□□ -1.53
RPRD1AQ96P16 RN7SKP145-201ENST00000363291 303 ntBASIC5.47□□□□□ -1.53
RPRD1AQ96P16 RNU1-43P-201ENST00000365052 165 ntBASIC5.47□□□□□ -1.53
RPRD1AQ96P16 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RPRD1AQ96P16 Z68694.1-201ENST00000413929 841 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms