Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTP4A1Q93096 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTP4A1Q93096 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 AL121886.1-201ENST00000358609 435 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 RN7SKP224-201ENST00000364140 325 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 RNA5SP433-201ENST00000364491 114 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 RNU6-883P-201ENST00000384597 107 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTP4A1Q93096 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 IFIT1P1-201ENST00000400497 1449 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTP4A1Q93096 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 AL133482.1-201ENST00000415988 498 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 NIFKP3-201ENST00000417799 865 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 DPY19L1P2-201ENST00000426647 915 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 YY1P1-201ENST00000427625 668 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 RPS26P4-201ENST00000431743 355 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 MTND2P21-201ENST00000436242 1042 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 AC110602.1-201ENST00000437414 318 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 DDX6P1-205ENST00000441966 1436 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 RPS23P2-201ENST00000463671 415 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 RN7SL515P-201ENST00000463999 297 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 AC074255.1-201ENST00000511259 501 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 SCARNA18.1-201ENST00000516330 83 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 RN7SKP70-201ENST00000516655 271 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 SEPT10P1-201ENST00000517342 1162 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 HMGB1P46-201ENST00000520062 610 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 IGLV3-30-201ENST00000524362 298 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 AC027369.2-201ENST00000528030 440 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 TOMM20P1-201ENST00000534518 427 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 AC079905.1-201ENST00000549280 475 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 AC006530.1-201ENST00000555980 571 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 SETP1-201ENST00000556014 845 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 CYCSP38-201ENST00000559840 322 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 OR4F13P-202ENST00000560066 2054 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 AC023158.1-201ENST00000561632 1025 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 AC021483.2-201ENST00000567415 758 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 PSMA6P4-201ENST00000603247 718 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 AC012467.1-201ENST00000607740 256 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 AC108673.3-201ENST00000609183 335 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 MIR6793-201ENST00000612376 63 ntBASIC5.1□□□□□ -1.59
PTP4A1Q93096 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTP4A1Q93096 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTP4A1Q93096 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTP4A1Q93096 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.1□□□□□ -1.59
PTP4A1Q93096 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTP4A1Q93096 THAP12P5-201ENST00000405864 2275 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 PCAT14-202ENST00000627127 3935 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTP4A1Q93096 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTP4A1Q93096 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTP4A1Q93096 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTP4A1Q93096 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 AL357752.1-201ENST00000412817 349 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 AC105402.1-201ENST00000413336 545 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 RANP4-201ENST00000413361 655 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 MTND4LP14-201ENST00000429447 288 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 NDUFB4P8-201ENST00000435351 367 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 AL359265.1-201ENST00000440296 795 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 AC093166.4-201ENST00000457867 318 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 AL122020.1-201ENST00000472287 459 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 OR9N1P-202ENST00000494289 481 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PTP4A1Q93096 GAPDHP71-201ENST00000511530 1003 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 AC122688.1-201ENST00000541494 223 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms