Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 NRBF2P4-201ENST00000520874 850 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 AP005262.1-201ENST00000582646 997 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 FO681491.1-202ENST00000623392 737 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 AC073593.1-201ENST00000624500 411 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 MIR193BHG-214ENST00000641765 509 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 STX3-208ENST00000641815 3236 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 SOCS5P3-201ENST00000425115 1576 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 NAMPTP1-201ENST00000440465 2514 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
NUDCD3Q8IVD9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
NUDCD3Q8IVD9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NUDCD3Q8IVD9 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.15□□□□□ -1.58
NUDCD3Q8IVD9 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NUDCD3Q8IVD9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.15□□□□□ -1.58
NUDCD3Q8IVD9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NUDCD3Q8IVD9 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NUDCD3Q8IVD9 AC093909.5-201ENST00000621839 1799 ntBASIC5.15□□□□□ -1.58
NUDCD3Q8IVD9 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 RNU1-74P-201ENST00000384108 171 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AC007068.1-201ENST00000396690 844 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AL133388.1-201ENST00000404509 287 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 HMGN1P20-201ENST00000411849 300 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 TPT1P1-201ENST00000458495 518 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AC104849.1-201ENST00000462623 405 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AP002884.1-201ENST00000479691 655 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 RN7SL741P-201ENST00000482473 289 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 RN7SL170P-201ENST00000487098 295 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AL671862.1-201ENST00000515851 349 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 RNA5SP271-201ENST00000516700 88 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AL049872.1-201ENST00000556323 322 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 RN7SL435P-201ENST00000584418 282 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AC118658.2-201ENST00000618697 459 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 CR383656.5-201ENST00000547616 1340 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 AP000542.2-201ENST00000623199 6179 ntBASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
NUDCD3Q8IVD9 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 AC007996.1-201ENST00000620414 2821 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 OR52B3P-201ENST00000314715 928 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 RN7SKP74-201ENST00000362849 309 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 OR8V1P-201ENST00000395193 873 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 VN1R12P-201ENST00000403778 876 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 U3.32-201ENST00000408116 212 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 AC099535.1-201ENST00000408928 371 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 RNU2-22P-201ENST00000411266 212 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 KCTD9P1-201ENST00000430462 1167 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms