Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HMGB1P45-201ENST00000435986 653 ntBASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 CALM1P1-201ENST00000442082 433 ntBASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AC117395.2-201ENST00000463122 1128 ntBASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 NIFKP7-201ENST00000503365 834 ntBASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 OR7E163P-201ENST00000505943 894 ntBASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 NXPE2P1-201ENST00000543705 726 ntBASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AC069240.2-201ENST00000550242 609 ntBASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 MIR744-201ENST00000578242 98 ntBASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AL390838.2-201ENST00000602394 274 ntBASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AC011453.2-201ENST00000603737 729 ntBASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AP001554.1-201ENST00000604533 376 ntBASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 FXYD6P1-201ENST00000604857 285 ntBASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AC023206.1-201ENST00000605824 298 ntBASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AL590396.3-201ENST00000636334 300 ntBASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 DDX10P2-201ENST00000417796 2614 ntBASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LYSMD3Q7Z3D4 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.34□□□□□ -1.24
LYSMD3Q7Z3D4 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.34□□□□□ -1.24
LYSMD3Q7Z3D4 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
LYSMD3Q7Z3D4 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 HCG18-244ENST00000602516 2890 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 ZNF812P-201ENST00000457674 1694 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 RNU6-463P-201ENST00000384340 107 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 AP000357.1-201ENST00000409926 1165 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 RN7SKP117-201ENST00000410175 264 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 RN7SKP58-201ENST00000411010 305 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 HMGB3P20-201ENST00000417997 600 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 NCOR1P3-201ENST00000420479 303 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 MYO5BP3-201ENST00000431872 1279 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 NIP7P1-201ENST00000433227 512 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 RPS19P6-201ENST00000441327 433 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 AC079781.1-201ENST00000441505 394 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 OR52E7P-201ENST00000452394 933 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 FABP3P2-201ENST00000453169 399 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 AL121877.1-201ENST00000453704 622 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 AC021660.1-201ENST00000465006 554 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 AC090589.1-201ENST00000473109 362 ntBASIC7.33□□□□□ -1.24
LYSMD3Q7Z3D4 CEACAMP3-202ENST00000483806 638 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms