Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MTCO1P35-201ENST00000515270 228 ntBASIC5.07□□□□□ -1.6
RIF1Q5UIP0 RN7SKP260-201ENST00000516907 149 ntBASIC5.07□□□□□ -1.6
RIF1Q5UIP0 OR8A2P-201ENST00000528631 952 ntBASIC5.07□□□□□ -1.6
RIF1Q5UIP0 AL049779.3-201ENST00000557141 606 ntBASIC5.07□□□□□ -1.6
RIF1Q5UIP0 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.07□□□□□ -1.6
RIF1Q5UIP0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.07□□□□□ -1.6
RIF1Q5UIP0 CR381572.2-201ENST00000624852 397 ntBASIC5.07□□□□□ -1.6
RIF1Q5UIP0 AC073869.8-201ENST00000641806 335 ntBASIC5.07□□□□□ -1.6
RIF1Q5UIP0 AC016251.2-201ENST00000623393 3089 ntBASIC5.07□□□□□ -1.6
RIF1Q5UIP0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.07□□□□□ -1.6
RIF1Q5UIP0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.07□□□□□ -1.6
RIF1Q5UIP0 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RIF1Q5UIP0 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RIF1Q5UIP0 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RIF1Q5UIP0 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RIF1Q5UIP0 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
RIF1Q5UIP0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AL121657.1-201ENST00000327215 531 ntBASIC5.06□□□□□ -1.6
RIF1Q5UIP0 MIR129-1-201ENST00000384972 72 ntBASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 ARL2BPP10-201ENST00000446487 531 ntBASIC5.06□□□□□ -1.6
RIF1Q5UIP0 OR1H1P-201ENST00000448731 937 ntBASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AC012400.1-201ENST00000518452 381 ntBASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AL121873.1-201ENST00000616013 524 ntBASIC5.06□□□□□ -1.6
RIF1Q5UIP0 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AC114876.1-201ENST00000490962 1366 ntBASIC5.06□□□□□ -1.6
RIF1Q5UIP0 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AC025031.4-201ENST00000621248 3271 ntBASIC5.06□□□□□ -1.6
RIF1Q5UIP0 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AL137845.2-201ENST00000444292 988 ntBASIC5.06□□□□□ -1.6
RIF1Q5UIP0 PRSS3P4-201ENST00000453323 162 ntBASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AP000797.2-201ENST00000475768 606 ntBASIC5.06□□□□□ -1.6
RIF1Q5UIP0 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AC068831.4-201ENST00000556118 109 ntBASIC5.06□□□□□ -1.6
RIF1Q5UIP0 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 NCOA4P3-201ENST00000513203 1877 ntBASIC5.06□□□□□ -1.6
RIF1Q5UIP0 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIF1Q5UIP0 AC073365.1-203ENST00000641055 1992 ntBASIC5.06□□□□□ -1.6
RIF1Q5UIP0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 Z95331.1-201ENST00000623075 23112 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 SNORD113.2-201ENST00000364166 89 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 RPS29P10-201ENST00000439197 166 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 RPL36AP15-201ENST00000444514 266 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 RSU1P1-201ENST00000453416 441 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 TRBV5-2-201ENST00000489095 273 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 AL138960.1-201ENST00000613838 513 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 TCL6_3.1-201ENST00000619064 137 ntBASIC5.05□□□□□ -1.6
RIF1Q5UIP0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIF1Q5UIP0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms