Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC3.05□□□□□ -1.92
HSPG2P98160 U3.35-201ENST00000408405 208 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.05□□□□□ -1.92
HSPG2P98160 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.05□□□□□ -1.92
HSPG2P98160 FABP5P2-201ENST00000439042 408 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC3.05□□□□□ -1.92
HSPG2P98160 RPL7L1P8-201ENST00000469911 741 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 AC091959.2-201ENST00000477363 321 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 RN7SL814P-201ENST00000487715 300 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 FTH1P21-201ENST00000512179 511 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 RNU1-103P-201ENST00000516502 125 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 RN7SKP83-201ENST00000516512 178 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC3.05□□□□□ -1.92
HSPG2P98160 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.05□□□□□ -1.92
HSPG2P98160 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.05□□□□□ -1.92
HSPG2P98160 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 SALL4P2-201ENST00000423288 2910 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.05□□□□□ -1.92
HSPG2P98160 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HSPG2P98160 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
HSPG2P98160 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 AC015799.1-201ENST00000622996 3122 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC3.05□□□□□ -1.92
HSPG2P98160 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.05□□□□□ -1.92
HSPG2P98160 SNORA73.1-201ENST00000363107 205 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 SNORD8-201ENST00000363915 110 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 SNORD56.6-201ENST00000384569 71 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC3.05□□□□□ -1.92
HSPG2P98160 NRBF2P3-201ENST00000432731 865 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.05□□□□□ -1.92
HSPG2P98160 RN7SL443P-201ENST00000464331 290 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 RPS12P31-201ENST00000491419 398 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 CCNG2P1-201ENST00000549521 1000 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 OR2BH1P-201ENST00000608850 864 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 AL023881.1-201ENST00000621088 301 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.05□□□□□ -1.92
HSPG2P98160 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
HSPG2P98160 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
HSPG2P98160 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HSPG2P98160 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
HSPG2P98160 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC3.05□□□□□ -1.92
HSPG2P98160 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 AC124944.2-201ENST00000429866 1242 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 VN1R34P-201ENST00000447387 883 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HSPG2P98160 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
HSPG2P98160 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC3.05□□□□□ -1.92
HSPG2P98160 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
HSPG2P98160 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.05□□□□□ -1.92
HSPG2P98160 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
HSPG2P98160 LRRC37A6P-202ENST00000448648 5444 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
HSPG2P98160 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC3.05□□□□□ -1.92
HSPG2P98160 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 MIR449B-201ENST00000384995 97 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 MIR589-201ENST00000385238 99 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 PPIAP31-201ENST00000405422 495 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.05□□□□□ -1.92
HSPG2P98160 AC114814.2-201ENST00000419195 485 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.05□□□□□ -1.92
HSPG2P98160 MTCO1P54-201ENST00000430139 712 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.05□□□□□ -1.92
HSPG2P98160 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HSPG2P98160 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HSPG2P98160 AC098976.1-201ENST00000513014 541 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.05□□□□□ -1.92
HSPG2P98160 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.05□□□□□ -1.92
HSPG2P98160 PMS2P3-207ENST00000529061 717 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.05□□□□□ -1.92
HSPG2P98160 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.05□□□□□ -1.92
HSPG2P98160 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC3.05□□□□□ -1.92
HSPG2P98160 AC091953.5-201ENST00000622919 233 ntBASIC3.05□□□□□ -1.92
HSPG2P98160 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.05□□□□□ -1.92
HSPG2P98160 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
HSPG2P98160 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms