Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.67□□□□□ -1.66
VBP1P61758 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.67□□□□□ -1.66
VBP1P61758 AC092601.1-201ENST00000444526 383 ntBASIC4.67□□□□□ -1.66
VBP1P61758 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.67□□□□□ -1.66
VBP1P61758 RBMY2HP-201ENST00000457961 720 ntBASIC4.67□□□□□ -1.66
VBP1P61758 CYCSP34-201ENST00000458172 304 ntBASIC4.67□□□□□ -1.66
VBP1P61758 RPSAP39-201ENST00000467439 883 ntBASIC4.67□□□□□ -1.66
VBP1P61758 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.67□□□□□ -1.66
VBP1P61758 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC4.67□□□□□ -1.66
VBP1P61758 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.67□□□□□ -1.66
VBP1P61758 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.67□□□□□ -1.66
VBP1P61758 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.67□□□□□ -1.66
VBP1P61758 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.67□□□□□ -1.66
VBP1P61758 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.67□□□□□ -1.66
VBP1P61758 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.67□□□□□ -1.66
VBP1P61758 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.67□□□□□ -1.66
VBP1P61758 AGGF1P9-201ENST00000561884 913 ntBASIC4.67□□□□□ -1.66
VBP1P61758 AC004232.2-201ENST00000574245 821 ntBASIC4.67□□□□□ -1.66
VBP1P61758 AC011891.2-201ENST00000604949 397 ntBASIC4.67□□□□□ -1.66
VBP1P61758 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.67□□□□□ -1.66
VBP1P61758 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.67□□□□□ -1.66
VBP1P61758 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VBP1P61758 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VBP1P61758 SCARNA15-201ENST00000607520 4325 ntBASIC4.67□□□□□ -1.66
VBP1P61758 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VBP1P61758 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VBP1P61758 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VBP1P61758 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VBP1P61758 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VBP1P61758 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VBP1P61758 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
VBP1P61758 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
VBP1P61758 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VBP1P61758 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VBP1P61758 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
VBP1P61758 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
VBP1P61758 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VBP1P61758 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.66□□□□□ -1.66
VBP1P61758 AC005294.1-201ENST00000355509 281 ntBASIC4.66□□□□□ -1.66
VBP1P61758 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VBP1P61758 RNA5SP198-201ENST00000410376 127 ntBASIC4.66□□□□□ -1.66
VBP1P61758 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.66□□□□□ -1.66
VBP1P61758 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC4.66□□□□□ -1.66
VBP1P61758 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.66□□□□□ -1.66
VBP1P61758 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.66□□□□□ -1.66
VBP1P61758 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.66□□□□□ -1.66
VBP1P61758 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.66□□□□□ -1.66
VBP1P61758 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.66□□□□□ -1.66
VBP1P61758 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.66□□□□□ -1.66
VBP1P61758 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VBP1P61758 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.66□□□□□ -1.66
VBP1P61758 DNAJB5P1-201ENST00000454004 806 ntBASIC4.66□□□□□ -1.66
VBP1P61758 AL445433.1-201ENST00000457507 257 ntBASIC4.66□□□□□ -1.66
VBP1P61758 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC4.66□□□□□ -1.66
VBP1P61758 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.66□□□□□ -1.66
VBP1P61758 AL122020.1-201ENST00000472287 459 ntBASIC4.66□□□□□ -1.66
VBP1P61758 RPS3AP15-201ENST00000483874 781 ntBASIC4.66□□□□□ -1.66
VBP1P61758 AC073073.1-201ENST00000493920 463 ntBASIC4.66□□□□□ -1.66
VBP1P61758 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.66□□□□□ -1.66
VBP1P61758 AC114324.2-202ENST00000503812 134 ntBASIC4.66□□□□□ -1.66
VBP1P61758 AC108103.1-201ENST00000511286 446 ntBASIC4.66□□□□□ -1.66
VBP1P61758 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.66□□□□□ -1.66
VBP1P61758 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.66□□□□□ -1.66
VBP1P61758 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC4.66□□□□□ -1.66
VBP1P61758 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC4.66□□□□□ -1.66
VBP1P61758 AC092332.1-201ENST00000563684 829 ntBASIC4.66□□□□□ -1.66
VBP1P61758 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC4.66□□□□□ -1.66
VBP1P61758 OR1F2P-201ENST00000570470 933 ntBASIC4.66□□□□□ -1.66
VBP1P61758 RN7SL52P-201ENST00000584271 284 ntBASIC4.66□□□□□ -1.66
VBP1P61758 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.66□□□□□ -1.66
VBP1P61758 TAS2R6P-201ENST00000605022 826 ntBASIC4.66□□□□□ -1.66
VBP1P61758 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.66□□□□□ -1.66
VBP1P61758 AL135999.3-201ENST00000610501 812 ntBASIC4.66□□□□□ -1.66
VBP1P61758 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.66□□□□□ -1.66
VBP1P61758 RN7SL787P-201ENST00000613000 284 ntBASIC4.66□□□□□ -1.66
VBP1P61758 RN7SL544P-201ENST00000617232 284 ntBASIC4.66□□□□□ -1.66
VBP1P61758 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VBP1P61758 RN7SL763P-201ENST00000620922 284 ntBASIC4.66□□□□□ -1.66
VBP1P61758 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.66□□□□□ -1.66
VBP1P61758 AC067931.1-201ENST00000624190 671 ntBASIC4.66□□□□□ -1.66
VBP1P61758 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VBP1P61758 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.66□□□□□ -1.66
VBP1P61758 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VBP1P61758 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VBP1P61758 MRE11P1-201ENST00000464884 2127 ntBASIC4.66□□□□□ -1.66
VBP1P61758 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VBP1P61758 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VBP1P61758 AL354854.1-201ENST00000455940 1363 ntBASIC4.65□□□□□ -1.66
VBP1P61758 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VBP1P61758 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VBP1P61758 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VBP1P61758 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VBP1P61758 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
VBP1P61758 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.65□□□□□ -1.66
VBP1P61758 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VBP1P61758 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VBP1P61758 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.65□□□□□ -1.66
VBP1P61758 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VBP1P61758 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.65□□□□□ -1.66
VBP1P61758 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms