Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXA3P55318 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
FOXA3P55318 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.87□□□□□ -1.79
FOXA3P55318 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.87□□□□□ -1.79
FOXA3P55318 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC3.87□□□□□ -1.79
FOXA3P55318 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXA3P55318 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
FOXA3P55318 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXA3P55318 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
FOXA3P55318 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.86□□□□□ -1.79
FOXA3P55318 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXA3P55318 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXA3P55318 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC3.86□□□□□ -1.79
FOXA3P55318 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXA3P55318 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXA3P55318 RNU1-150P-201ENST00000362491 162 ntBASIC3.86□□□□□ -1.79
FOXA3P55318 RN7SKP257-201ENST00000364525 309 ntBASIC3.86□□□□□ -1.79
FOXA3P55318 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC3.86□□□□□ -1.79
FOXA3P55318 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC3.86□□□□□ -1.79
FOXA3P55318 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXA3P55318 AL035079.1-201ENST00000405210 287 ntBASIC3.86□□□□□ -1.79
FOXA3P55318 RN7SKP199-201ENST00000410325 305 ntBASIC3.86□□□□□ -1.79
FOXA3P55318 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.86□□□□□ -1.79
FOXA3P55318 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXA3P55318 FABP7P2-201ENST00000429946 379 ntBASIC3.86□□□□□ -1.79
FOXA3P55318 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FOXA3P55318 GAPDHP25-201ENST00000447061 1001 ntBASIC3.86□□□□□ -1.79
FOXA3P55318 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FOXA3P55318 VDAC2P4-201ENST00000452925 711 ntBASIC3.86□□□□□ -1.79
FOXA3P55318 PPIAP27-201ENST00000453800 265 ntBASIC3.86□□□□□ -1.79
FOXA3P55318 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FOXA3P55318 AC011225.1-201ENST00000457751 369 ntBASIC3.86□□□□□ -1.79
FOXA3P55318 AC009963.3-201ENST00000458090 486 ntBASIC3.86□□□□□ -1.79
FOXA3P55318 RPL29P23-201ENST00000486188 442 ntBASIC3.86□□□□□ -1.79
FOXA3P55318 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC3.86□□□□□ -1.79
FOXA3P55318 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXA3P55318 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.86□□□□□ -1.79
FOXA3P55318 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXA3P55318 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXA3P55318 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC3.86□□□□□ -1.79
FOXA3P55318 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXA3P55318 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXA3P55318 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXA3P55318 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
FOXA3P55318 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FOXA3P55318 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXA3P55318 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXA3P55318 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXA3P55318 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXA3P55318 MAPK10-320ENST00000641462 6696 ntBASIC3.86□□□□□ -1.79
FOXA3P55318 AL133268.1-201ENST00000405676 1401 ntBASIC3.86□□□□□ -1.79
FOXA3P55318 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
FOXA3P55318 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FOXA3P55318 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
FOXA3P55318 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXA3P55318 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXA3P55318 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXA3P55318 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXA3P55318 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXA3P55318 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXA3P55318 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXA3P55318 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXA3P55318 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
FOXA3P55318 RBBP4P5-201ENST00000398583 1266 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXA3P55318 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXA3P55318 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXA3P55318 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXA3P55318 AL139158.1-201ENST00000424719 340 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXA3P55318 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXA3P55318 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXA3P55318 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXA3P55318 AL450996.1-201ENST00000445574 1202 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXA3P55318 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXA3P55318 AC004980.3-201ENST00000447046 365 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXA3P55318 AC093166.2-201ENST00000455969 1017 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXA3P55318 OARD1-211ENST00000480585 829 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXA3P55318 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXA3P55318 RN7SL441P-201ENST00000492388 296 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXA3P55318 AC011411.1-201ENST00000509592 876 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXA3P55318 TCP11X3P-202ENST00000514289 1254 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 Y_RNA.667-201ENST00000516212 107 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 SCARNA16.4-201ENST00000516956 187 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 AC113191.1-201ENST00000517759 403 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
FOXA3P55318 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC3.85□□□□□ -1.79
FOXA3P55318 MED21-206ENST00000546323 575 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXA3P55318 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXA3P55318 AL049830.4-201ENST00000555149 351 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXA3P55318 AC116553.2-201ENST00000564203 463 ntBASIC3.85□□□□□ -1.79
FOXA3P55318 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXA3P55318 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms