Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH11P55287 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH11P55287 RPS26P24-201ENST00000497656 331 ntBASIC5.08□□□□□ -1.6
CDH11P55287 MTND3P24-201ENST00000506306 329 ntBASIC5.08□□□□□ -1.6
CDH11P55287 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH11P55287 OR4A46P-201ENST00000527255 933 ntBASIC5.08□□□□□ -1.6
CDH11P55287 PMS2P3-207ENST00000529061 717 ntBASIC5.08□□□□□ -1.6
CDH11P55287 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH11P55287 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH11P55287 CR383656.14-201ENST00000551951 406 ntBASIC5.08□□□□□ -1.6
CDH11P55287 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CDH11P55287 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH11P55287 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH11P55287 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.08□□□□□ -1.6
CDH11P55287 AC020978.7-201ENST00000575953 1187 ntBASIC5.08□□□□□ -1.6
CDH11P55287 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH11P55287 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH11P55287 AC144521.1-201ENST00000607148 956 ntBASIC5.08□□□□□ -1.6
CDH11P55287 AL355802.4-201ENST00000607635 548 ntBASIC5.08□□□□□ -1.6
CDH11P55287 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH11P55287 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH11P55287 AL049767.1-202ENST00000637826 242 ntBASIC5.08□□□□□ -1.6
CDH11P55287 AC087565.3-203ENST00000641018 837 ntBASIC5.08□□□□□ -1.6
CDH11P55287 AC112198.2-201ENST00000426589 6996 ntBASIC5.08□□□□□ -1.6
CDH11P55287 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH11P55287 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CDH11P55287 AL603750.1-201ENST00000624216 1717 ntBASIC5.08□□□□□ -1.6
CDH11P55287 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH11P55287 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
CDH11P55287 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH11P55287 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH11P55287 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH11P55287 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH11P55287 MAPK10-338ENST00000641647 3362 ntBASIC5.07□□□□□ -1.6
CDH11P55287 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH11P55287 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH11P55287 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.07□□□□□ -1.6
CDH11P55287 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH11P55287 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH11P55287 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH11P55287 AC133552.1-201ENST00000569988 4007 ntBASIC5.07□□□□□ -1.6
CDH11P55287 AC093909.5-201ENST00000621839 1799 ntBASIC5.07□□□□□ -1.6
CDH11P55287 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CDH11P55287 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDH11P55287 MIR421-201ENST00000365696 85 ntBASIC5.07□□□□□ -1.6
CDH11P55287 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH11P55287 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH11P55287 RN7SKP229-201ENST00000410465 302 ntBASIC5.07□□□□□ -1.6
CDH11P55287 RN7SKP29-201ENST00000410957 272 ntBASIC5.07□□□□□ -1.6
CDH11P55287 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH11P55287 AC079355.1-201ENST00000421770 223 ntBASIC5.07□□□□□ -1.6
CDH11P55287 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH11P55287 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CDH11P55287 GAPDHP48-201ENST00000436626 961 ntBASIC5.07□□□□□ -1.6
CDH11P55287 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH11P55287 NANOGP9-201ENST00000439890 892 ntBASIC5.07□□□□□ -1.6
CDH11P55287 MTND2P25-201ENST00000449028 610 ntBASIC5.07□□□□□ -1.6
CDH11P55287 RPL31P20-201ENST00000449593 360 ntBASIC5.07□□□□□ -1.6
CDH11P55287 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH11P55287 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH11P55287 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH11P55287 AC025768.1-201ENST00000510057 267 ntBASIC5.07□□□□□ -1.6
CDH11P55287 TMEM97P2-201ENST00000517841 403 ntBASIC5.07□□□□□ -1.6
CDH11P55287 AC139365.2-201ENST00000517972 253 ntBASIC5.07□□□□□ -1.6
CDH11P55287 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH11P55287 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH11P55287 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH11P55287 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH11P55287 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.07□□□□□ -1.6
CDH11P55287 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH11P55287 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH11P55287 AC096996.1-201ENST00000563813 325 ntBASIC5.07□□□□□ -1.6
CDH11P55287 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CDH11P55287 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.07□□□□□ -1.6
CDH11P55287 AC010547.6-201ENST00000571789 193 ntBASIC5.07□□□□□ -1.6
CDH11P55287 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH11P55287 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH11P55287 MIR4260-201ENST00000583107 67 ntBASIC5.07□□□□□ -1.6
CDH11P55287 AL671309.1-201ENST00000603750 544 ntBASIC5.07□□□□□ -1.6
CDH11P55287 AL158211.2-201ENST00000607282 395 ntBASIC5.07□□□□□ -1.6
CDH11P55287 AC109309.2-201ENST00000612597 332 ntBASIC5.07□□□□□ -1.6
CDH11P55287 RNA5SP440-201ENST00000612665 119 ntBASIC5.07□□□□□ -1.6
CDH11P55287 AC090607.5-201ENST00000615692 224 ntBASIC5.07□□□□□ -1.6
CDH11P55287 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.07□□□□□ -1.6
CDH11P55287 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.07□□□□□ -1.6
CDH11P55287 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CDH11P55287 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH11P55287 AC006206.1-201ENST00000544842 3387 ntBASIC5.07□□□□□ -1.6
CDH11P55287 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH11P55287 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH11P55287 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CDH11P55287 AC018809.2-201ENST00000602436 3823 ntBASIC5.07□□□□□ -1.6
CDH11P55287 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH11P55287 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH11P55287 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CDH11P55287 AC083843.2-201ENST00000568248 6253 ntBASIC5.07□□□□□ -1.6
CDH11P55287 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH11P55287 HSPA8P14-201ENST00000552265 1805 ntBASIC5.07□□□□□ -1.6
CDH11P55287 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.06□□□□□ -1.6
CDH11P55287 NAMPTP1-201ENST00000440465 2514 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms