Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC234771.5-201ENST00000600161 514 ntBASIC5.98□□□□□ -1.45
HMGCS2P54868 AC008745.1-201ENST00000604064 271 ntBASIC5.98□□□□□ -1.45
HMGCS2P54868 AP000346.3-201ENST00000622821 210 ntBASIC5.98□□□□□ -1.45
HMGCS2P54868 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS2P54868 BX284613.1-201ENST00000452221 1641 ntBASIC5.98□□□□□ -1.45
HMGCS2P54868 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HMGCS2P54868 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS2P54868 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS2P54868 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS2P54868 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS2P54868 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGCS2P54868 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS2P54868 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS2P54868 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGCS2P54868 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS2P54868 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
HMGCS2P54868 MTHFD2P5-201ENST00000320415 844 ntBASIC5.97□□□□□ -1.45
HMGCS2P54868 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS2P54868 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGCS2P54868 AC092017.2-201ENST00000427600 362 ntBASIC5.97□□□□□ -1.45
HMGCS2P54868 AC124944.2-201ENST00000429866 1242 ntBASIC5.97□□□□□ -1.45
HMGCS2P54868 AL161722.2-201ENST00000434731 981 ntBASIC5.97□□□□□ -1.45
HMGCS2P54868 AL138878.2-201ENST00000440581 1241 ntBASIC5.97□□□□□ -1.45
HMGCS2P54868 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGCS2P54868 NOP56P2-201ENST00000447491 769 ntBASIC5.97□□□□□ -1.45
HMGCS2P54868 RPL5P22-201ENST00000480199 884 ntBASIC5.97□□□□□ -1.45
HMGCS2P54868 RN7SL346P-201ENST00000491561 294 ntBASIC5.97□□□□□ -1.45
HMGCS2P54868 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGCS2P54868 IGBP1P4-201ENST00000503202 879 ntBASIC5.97□□□□□ -1.45
HMGCS2P54868 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS2P54868 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGCS2P54868 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.97□□□□□ -1.45
HMGCS2P54868 AC008147.3-201ENST00000548666 354 ntBASIC5.97□□□□□ -1.45
HMGCS2P54868 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGCS2P54868 BGLT3-201ENST00000564523 994 ntBASIC5.97□□□□□ -1.45
HMGCS2P54868 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGCS2P54868 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGCS2P54868 NLRP3P1-201ENST00000622303 1785 ntBASIC5.97□□□□□ -1.45
HMGCS2P54868 AC140479.2-201ENST00000421567 3130 ntBASIC5.97□□□□□ -1.45
HMGCS2P54868 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGCS2P54868 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS2P54868 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGCS2P54868 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGCS2P54868 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HMGCS2P54868 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGCS2P54868 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS2P54868 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HMGCS2P54868 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HMGCS2P54868 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS2P54868 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS2P54868 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS2P54868 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HMGCS2P54868 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HMGCS2P54868 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
HMGCS2P54868 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.96□□□□□ -1.45
HMGCS2P54868 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HMGCS2P54868 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
HMGCS2P54868 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.96□□□□□ -1.45
HMGCS2P54868 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
HMGCS2P54868 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HMGCS2P54868 NR1H5P-201ENST00000452683 1377 ntBASIC5.96□□□□□ -1.45
HMGCS2P54868 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
HMGCS2P54868 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGCS2P54868 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGCS2P54868 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGCS2P54868 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGCS2P54868 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGCS2P54868 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGCS2P54868 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGCS2P54868 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGCS2P54868 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGCS2P54868 RNU6-398P-201ENST00000384143 109 ntBASIC5.96□□□□□ -1.46
HMGCS2P54868 AL133482.1-201ENST00000415988 498 ntBASIC5.96□□□□□ -1.46
HMGCS2P54868 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGCS2P54868 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGCS2P54868 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGCS2P54868 AL137845.2-201ENST00000444292 988 ntBASIC5.96□□□□□ -1.46
HMGCS2P54868 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGCS2P54868 RN7SL189P-201ENST00000468631 289 ntBASIC5.96□□□□□ -1.46
HMGCS2P54868 AC020779.1-201ENST00000478757 796 ntBASIC5.96□□□□□ -1.46
HMGCS2P54868 RPL7P41-201ENST00000485823 957 ntBASIC5.96□□□□□ -1.46
HMGCS2P54868 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGCS2P54868 GLUD1P3-202ENST00000508551 200 ntBASIC5.96□□□□□ -1.46
HMGCS2P54868 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGCS2P54868 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HMGCS2P54868 UBE2FP2-201ENST00000566646 462 ntBASIC5.96□□□□□ -1.46
HMGCS2P54868 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGCS2P54868 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGCS2P54868 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGCS2P54868 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGCS2P54868 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGCS2P54868 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGCS2P54868 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGCS2P54868 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGCS2P54868 AC004076.2-201ENST00000620532 3323 ntBASIC5.96□□□□□ -1.46
HMGCS2P54868 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGCS2P54868 AC034229.2-201ENST00000566945 2508 ntBASIC5.96□□□□□ -1.46
HMGCS2P54868 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGCS2P54868 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HMGCS2P54868 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms