Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.53□□□□□ -1.36
EPHB3P54753 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.53□□□□□ -1.36
EPHB3P54753 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.53□□□□□ -1.36
EPHB3P54753 AC112184.1-201ENST00000505179 312 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC6.53□□□□□ -1.36
EPHB3P54753 RNA5SP340-201ENST00000517132 107 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.53□□□□□ -1.36
EPHB3P54753 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.53□□□□□ -1.36
EPHB3P54753 IGHV1-14-201ENST00000523391 241 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.53□□□□□ -1.36
EPHB3P54753 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.53□□□□□ -1.36
EPHB3P54753 OR5AM1P-201ENST00000532136 1032 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 AP000916.1-201ENST00000533869 835 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.53□□□□□ -1.36
EPHB3P54753 AC005000.1-201ENST00000536192 288 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 RPA2P1-201ENST00000556557 721 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.53□□□□□ -1.36
EPHB3P54753 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.53□□□□□ -1.36
EPHB3P54753 AC025918.2-201ENST00000558683 763 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 AC090695.1-201ENST00000561269 1222 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC6.53□□□□□ -1.36
EPHB3P54753 AC022069.1-201ENST00000582910 658 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 AC233702.7-202ENST00000582941 211 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 RSL24D1P11-201ENST00000591045 491 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 MTND3P19-201ENST00000603825 345 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 AL163642.2-201ENST00000604722 1019 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 AC072039.2-201ENST00000608883 439 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.53□□□□□ -1.36
EPHB3P54753 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
EPHB3P54753 AC006600.2-201ENST00000624834 2506 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
EPHB3P54753 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
EPHB3P54753 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.53□□□□□ -1.36
EPHB3P54753 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
EPHB3P54753 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
EPHB3P54753 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
EPHB3P54753 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.53□□□□□ -1.36
EPHB3P54753 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.53□□□□□ -1.36
EPHB3P54753 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 ANKRD36BP1-202ENST00000604892 1417 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
EPHB3P54753 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
EPHB3P54753 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 RNY3P14-201ENST00000384309 102 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.52□□□□□ -1.37
EPHB3P54753 AL390774.1-201ENST00000411924 246 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 UBE2V1P14-201ENST00000415815 558 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 RPL35AP31-201ENST00000418340 337 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.52□□□□□ -1.37
EPHB3P54753 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.52□□□□□ -1.37
EPHB3P54753 RPS3P2-201ENST00000421346 701 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.52□□□□□ -1.37
EPHB3P54753 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.52□□□□□ -1.37
EPHB3P54753 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.52□□□□□ -1.37
EPHB3P54753 MTCO2P19-201ENST00000427513 598 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.52□□□□□ -1.37
EPHB3P54753 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 AC234781.3-201ENST00000452540 973 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 ACA64.1-201ENST00000459171 127 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.52□□□□□ -1.37
EPHB3P54753 BZW1P2-201ENST00000473537 826 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.52□□□□□ -1.37
EPHB3P54753 AC008410.1-201ENST00000483777 339 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 AC004815.1-201ENST00000484185 331 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 RNU2-30P-201ENST00000516209 141 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
EPHB3P54753 AC004923.2-201ENST00000529649 369 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.52□□□□□ -1.37
EPHB3P54753 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.52□□□□□ -1.37
EPHB3P54753 SERPINE4P-201ENST00000554978 281 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 AC023813.2-201ENST00000564321 469 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 AC087481.2-201ENST00000565492 330 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.52□□□□□ -1.37
EPHB3P54753 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.52□□□□□ -1.37
EPHB3P54753 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC6.52□□□□□ -1.37
EPHB3P54753 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.52□□□□□ -1.37
EPHB3P54753 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.52□□□□□ -1.37
EPHB3P54753 AP002906.1-201ENST00000603405 233 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 LARP7P1-201ENST00000605576 316 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 AC010975.3-201ENST00000618727 978 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 AC008627.1-201ENST00000517511 1704 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 MTND4P29-201ENST00000503122 1372 ntBASIC6.52□□□□□ -1.37
EPHB3P54753 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.52□□□□□ -1.37
EPHB3P54753 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.52□□□□□ -1.37
EPHB3P54753 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
EPHB3P54753 AC027279.1-201ENST00000568885 4284 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms