Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CR1P49238 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CR1P49238 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.68□□□□□ -1.66
CX3CR1P49238 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CR1P49238 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CR1P49238 TRIM51GP-201ENST00000534741 1350 ntBASIC4.68□□□□□ -1.66
CX3CR1P49238 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CR1P49238 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
CX3CR1P49238 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.68□□□□□ -1.66
CX3CR1P49238 RAB9AP4-201ENST00000415230 609 ntBASIC4.68□□□□□ -1.66
CX3CR1P49238 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.68□□□□□ -1.66
CX3CR1P49238 GNG5P5-201ENST00000420444 220 ntBASIC4.68□□□□□ -1.66
CX3CR1P49238 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.68□□□□□ -1.66
CX3CR1P49238 SRSF1P1-201ENST00000424058 520 ntBASIC4.68□□□□□ -1.66
CX3CR1P49238 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CX3CR1P49238 HSPD1P12-201ENST00000429127 1069 ntBASIC4.68□□□□□ -1.66
CX3CR1P49238 AC124944.2-201ENST00000429866 1242 ntBASIC4.68□□□□□ -1.66
CX3CR1P49238 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.68□□□□□ -1.66
CX3CR1P49238 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.68□□□□□ -1.66
CX3CR1P49238 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.68□□□□□ -1.66
CX3CR1P49238 AC064862.4-201ENST00000442180 334 ntBASIC4.68□□□□□ -1.66
CX3CR1P49238 AC105399.1-202ENST00000447303 205 ntBASIC4.68□□□□□ -1.66
CX3CR1P49238 RN7SL51P-201ENST00000468230 285 ntBASIC4.68□□□□□ -1.66
CX3CR1P49238 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.68□□□□□ -1.66
CX3CR1P49238 MYL12BP2-201ENST00000503948 512 ntBASIC4.68□□□□□ -1.66
CX3CR1P49238 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.68□□□□□ -1.66
CX3CR1P49238 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.68□□□□□ -1.66
CX3CR1P49238 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.68□□□□□ -1.66
CX3CR1P49238 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CR1P49238 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.68□□□□□ -1.66
CX3CR1P49238 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CR1P49238 AC068993.1-201ENST00000546724 589 ntBASIC4.68□□□□□ -1.66
CX3CR1P49238 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.68□□□□□ -1.66
CX3CR1P49238 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CX3CR1P49238 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.68□□□□□ -1.66
CX3CR1P49238 MTCYBP13-201ENST00000578634 1093 ntBASIC4.68□□□□□ -1.66
CX3CR1P49238 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.68□□□□□ -1.66
CX3CR1P49238 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.68□□□□□ -1.66
CX3CR1P49238 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.68□□□□□ -1.66
CX3CR1P49238 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.68□□□□□ -1.66
CX3CR1P49238 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.68□□□□□ -1.66
CX3CR1P49238 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CR1P49238 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CR1P49238 SMG1P4-204ENST00000523028 4131 ntBASIC4.68□□□□□ -1.66
CX3CR1P49238 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.68□□□□□ -1.66
CX3CR1P49238 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CR1P49238 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CR1P49238 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CR1P49238 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CR1P49238 AL034549.2-201ENST00000618285 3373 ntBASIC4.68□□□□□ -1.66
CX3CR1P49238 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.68□□□□□ -1.66
CX3CR1P49238 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.68□□□□□ -1.66
CX3CR1P49238 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.68□□□□□ -1.66
CX3CR1P49238 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CR1P49238 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
CX3CR1P49238 THAP12P5-201ENST00000405864 2275 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 AC123912.3-201ENST00000600907 1367 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CR1P49238 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.67□□□□□ -1.66
CX3CR1P49238 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.67□□□□□ -1.66
CX3CR1P49238 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.67□□□□□ -1.66
CX3CR1P49238 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.67□□□□□ -1.66
CX3CR1P49238 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.67□□□□□ -1.66
CX3CR1P49238 AC017079.1-201ENST00000333650 415 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 RNA5SP319-201ENST00000362768 119 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 RN7SKP153-201ENST00000365026 316 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 AL353625.1-202ENST00000366273 571 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 RNU6-729P-201ENST00000384399 107 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 MIR621-201ENST00000384919 96 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 HSPA8P15-201ENST00000401676 786 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CX3CR1P49238 RPL21P67-201ENST00000402896 478 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.67□□□□□ -1.66
CX3CR1P49238 PCNPP4-201ENST00000414817 517 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 KCTD9P1-201ENST00000430462 1167 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 RPL23AP19-201ENST00000436229 369 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 NPM1P19-201ENST00000450070 712 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 PRPF38AP1-201ENST00000451976 933 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.67□□□□□ -1.66
CX3CR1P49238 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CR1P49238 AC113398.2-201ENST00000507630 558 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.67□□□□□ -1.66
CX3CR1P49238 RNU4-18P-201ENST00000516751 149 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 AC022360.1-201ENST00000521058 340 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.67□□□□□ -1.66
CX3CR1P49238 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.67□□□□□ -1.66
CX3CR1P49238 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.67□□□□□ -1.66
CX3CR1P49238 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.67□□□□□ -1.66
CX3CR1P49238 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.67□□□□□ -1.66
CX3CR1P49238 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.67□□□□□ -1.66
CX3CR1P49238 AC018552.1-201ENST00000562099 811 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 MIR3936-201ENST00000584304 110 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.67□□□□□ -1.66
CX3CR1P49238 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.67□□□□□ -1.66
CX3CR1P49238 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.67□□□□□ -1.66
CX3CR1P49238 AC073575.2-201ENST00000614212 627 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 AC244517.3-201ENST00000616254 1235 ntBASIC4.67□□□□□ -1.66
CX3CR1P49238 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.67□□□□□ -1.66
CX3CR1P49238 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.67□□□□□ -1.66
CX3CR1P49238 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms