Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFC4P35249 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.58□□□□□ -1.36
RFC4P35249 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFC4P35249 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.58□□□□□ -1.36
RFC4P35249 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFC4P35249 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFC4P35249 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.58□□□□□ -1.36
RFC4P35249 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFC4P35249 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.58□□□□□ -1.36
RFC4P35249 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.58□□□□□ -1.36
RFC4P35249 AC092570.3-201ENST00000420113 693 ntBASIC6.58□□□□□ -1.36
RFC4P35249 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.58□□□□□ -1.36
RFC4P35249 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.58□□□□□ -1.36
RFC4P35249 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.58□□□□□ -1.36
RFC4P35249 OR52J1P-201ENST00000450596 932 ntBASIC6.58□□□□□ -1.36
RFC4P35249 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.58□□□□□ -1.36
RFC4P35249 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.58□□□□□ -1.36
RFC4P35249 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.58□□□□□ -1.36
RFC4P35249 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.58□□□□□ -1.36
RFC4P35249 AP001804.1-201ENST00000526868 919 ntBASIC6.58□□□□□ -1.36
RFC4P35249 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.58□□□□□ -1.36
RFC4P35249 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.58□□□□□ -1.36
RFC4P35249 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.58□□□□□ -1.36
RFC4P35249 AC083809.1-201ENST00000615051 472 ntBASIC6.58□□□□□ -1.36
RFC4P35249 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.58□□□□□ -1.36
RFC4P35249 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.58□□□□□ -1.36
RFC4P35249 AP003400.3-201ENST00000624904 346 ntBASIC6.58□□□□□ -1.36
RFC4P35249 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.58□□□□□ -1.36
RFC4P35249 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
RFC4P35249 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFC4P35249 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFC4P35249 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFC4P35249 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFC4P35249 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.58□□□□□ -1.36
RFC4P35249 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RFC4P35249 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFC4P35249 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFC4P35249 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFC4P35249 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.58□□□□□ -1.36
RFC4P35249 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RFC4P35249 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFC4P35249 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFC4P35249 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFC4P35249 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFC4P35249 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.57□□□□□ -1.36
RFC4P35249 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
RFC4P35249 RNU1-59P-201ENST00000364829 162 ntBASIC6.57□□□□□ -1.36
RFC4P35249 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFC4P35249 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.57□□□□□ -1.36
RFC4P35249 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFC4P35249 Z97832.1-201ENST00000402490 328 ntBASIC6.57□□□□□ -1.36
RFC4P35249 PSAT1P4-201ENST00000466500 526 ntBASIC6.57□□□□□ -1.36
RFC4P35249 AC068587.1-201ENST00000483613 781 ntBASIC6.57□□□□□ -1.36
RFC4P35249 AC021106.1-201ENST00000509020 1058 ntBASIC6.57□□□□□ -1.36
RFC4P35249 GCSHP4-201ENST00000538792 439 ntBASIC6.57□□□□□ -1.36
RFC4P35249 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.57□□□□□ -1.36
RFC4P35249 AC091042.1-201ENST00000579213 173 ntBASIC6.57□□□□□ -1.36
RFC4P35249 MIR3667-201ENST00000581025 74 ntBASIC6.57□□□□□ -1.36
RFC4P35249 AL353729.2-201ENST00000605859 1249 ntBASIC6.57□□□□□ -1.36
RFC4P35249 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.57□□□□□ -1.36
RFC4P35249 U1.25-201ENST00000614085 162 ntBASIC6.57□□□□□ -1.36
RFC4P35249 U1.34-201ENST00000618578 162 ntBASIC6.57□□□□□ -1.36
RFC4P35249 U1.31-201ENST00000620022 160 ntBASIC6.57□□□□□ -1.36
RFC4P35249 MIR6758-201ENST00000620653 63 ntBASIC6.57□□□□□ -1.36
RFC4P35249 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.57□□□□□ -1.36
RFC4P35249 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.57□□□□□ -1.36
RFC4P35249 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.57□□□□□ -1.36
RFC4P35249 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.57□□□□□ -1.36
RFC4P35249 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFC4P35249 BCORP1-203ENST00000513194 5093 ntBASIC6.57□□□□□ -1.36
RFC4P35249 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFC4P35249 AC015799.1-201ENST00000622996 3122 ntBASIC6.57□□□□□ -1.36
RFC4P35249 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.57□□□□□ -1.36
RFC4P35249 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFC4P35249 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
RFC4P35249 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFC4P35249 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RFC4P35249 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFC4P35249 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
RFC4P35249 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RFC4P35249 SNX18P3-202ENST00000565670 1750 ntBASIC6.57□□□□□ -1.36
RFC4P35249 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.56□□□□□ -1.36
RFC4P35249 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.56□□□□□ -1.36
RFC4P35249 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
RFC4P35249 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RFC4P35249 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
RFC4P35249 SCARNA15-201ENST00000607520 4325 ntBASIC6.56□□□□□ -1.36
RFC4P35249 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFC4P35249 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RFC4P35249 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RFC4P35249 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.56□□□□□ -1.36
RFC4P35249 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.56□□□□□ -1.36
RFC4P35249 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
RFC4P35249 SNORA66-201ENST00000384792 133 ntBASIC6.56□□□□□ -1.36
RFC4P35249 GLULP6-201ENST00000399502 913 ntBASIC6.56□□□□□ -1.36
RFC4P35249 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.56□□□□□ -1.36
RFC4P35249 RPL5P25-201ENST00000441148 775 ntBASIC6.56□□□□□ -1.36
RFC4P35249 AC012512.1-201ENST00000446594 718 ntBASIC6.56□□□□□ -1.36
RFC4P35249 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.56□□□□□ -1.36
RFC4P35249 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms