Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DMBP28068 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DMBP28068 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DMBP28068 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DMBP28068 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DMBP28068 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 AC073136.1-201ENST00000449426 2884 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DMBP28068 CIR1P2-201ENST00000514821 1342 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DMBP28068 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 RN7SKP160-201ENST00000363804 340 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 AC007618.1-201ENST00000366455 732 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 DBIP1-201ENST00000401435 260 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 OR4K12P-201ENST00000406538 961 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 GABARAPL3-201ENST00000412799 354 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 AL596448.1-201ENST00000415024 392 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DMBP28068 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 AC090018.1-201ENST00000434369 367 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 GSTM5P1-201ENST00000434751 660 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 AL035090.1-201ENST00000454835 332 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 LDHBP2-201ENST00000456969 1005 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 AC245028.2-201ENST00000458673 253 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 AC027369.5-201ENST00000533838 755 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DMBP28068 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 NMNAT1P5-201ENST00000559657 841 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 RNU6-84P-201ENST00000607737 102 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 AC079395.2-201ENST00000610982 737 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 AC091932.2-201ENST00000623014 291 ntBASIC4.05□□□□□ -1.76
HLA-DMBP28068 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DMBP28068 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DMBP28068 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DMBP28068 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DMBP28068 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DMBP28068 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DMBP28068 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DMBP28068 NEAT1-202ENST00000501122 22743 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DMBP28068 DDX18P6-201ENST00000450119 1997 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 AC079298.1-201ENST00000625026 1619 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DMBP28068 OR9G4-201ENST00000302957 984 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 RNU4-44P-201ENST00000363050 141 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 RNA5SP132-201ENST00000364725 118 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 RN7SKP124-201ENST00000364730 341 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 AL391361.1-201ENST00000405580 489 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 GAPDHP42-201ENST00000406848 981 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 OR13Z1P-201ENST00000416141 834 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DMBP28068 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 AC012512.1-201ENST00000446594 718 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 AC058823.1-201ENST00000485315 474 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 RN7SL629P-201ENST00000489622 285 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 RPS12P31-201ENST00000491419 398 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 RPS4XP14-201ENST00000493072 781 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 RN7SL591P-201ENST00000496150 292 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 NIFKP7-201ENST00000503365 834 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 BX510359.5-201ENST00000515651 304 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 SCARNA16.4-201ENST00000516956 187 ntBASIC4.04□□□□□ -1.76
HLA-DMBP28068 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.04□□□□□ -1.76
HLA-DMBP28068 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DMBP28068 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms