Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
POLR2AP24928 GCSHP4-201ENST00000538792 439 ntBASIC6.3□□□□□ -1.4
POLR2AP24928 YWHABP2-201ENST00000540201 713 ntBASIC6.3□□□□□ -1.4
POLR2AP24928 HIRAP1-201ENST00000605318 787 ntBASIC6.3□□□□□ -1.4
POLR2AP24928 AC135803.1-201ENST00000608748 565 ntBASIC6.3□□□□□ -1.4
POLR2AP24928 AL356608.1-201ENST00000610034 820 ntBASIC6.3□□□□□ -1.4
POLR2AP24928 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
POLR2AP24928 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
POLR2AP24928 AC004808.1-201ENST00000627671 721 ntBASIC6.3□□□□□ -1.4
POLR2AP24928 AC068620.4-201ENST00000636730 1182 ntBASIC6.3□□□□□ -1.4
POLR2AP24928 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
POLR2AP24928 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
POLR2AP24928 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
POLR2AP24928 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.3□□□□□ -1.4
POLR2AP24928 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.3□□□□□ -1.4
POLR2AP24928 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.3□□□□□ -1.4
POLR2AP24928 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
POLR2AP24928 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
POLR2AP24928 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
POLR2AP24928 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.3□□□□□ -1.4
POLR2AP24928 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.3□□□□□ -1.4
POLR2AP24928 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.3□□□□□ -1.4
POLR2AP24928 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
POLR2AP24928 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.29□□□□□ -1.4
POLR2AP24928 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
POLR2AP24928 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
POLR2AP24928 AL049693.1-201ENST00000402760 611 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 COX6CP17-201ENST00000421389 185 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.29□□□□□ -1.4
POLR2AP24928 ELOCP11-201ENST00000436690 332 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.29□□□□□ -1.4
POLR2AP24928 ELOCP13-201ENST00000443934 329 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 ELOCP16-201ENST00000444494 332 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
POLR2AP24928 AC009127.1-201ENST00000467090 155 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 RN7SL481P-201ENST00000477764 299 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC6.29□□□□□ -1.4
POLR2AP24928 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.29□□□□□ -1.4
POLR2AP24928 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.29□□□□□ -1.4
POLR2AP24928 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.29□□□□□ -1.4
POLR2AP24928 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.29□□□□□ -1.4
POLR2AP24928 AC005341.1-201ENST00000571086 708 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
POLR2AP24928 AC068620.3-201ENST00000602749 560 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.29□□□□□ -1.4
POLR2AP24928 AC140725.3-201ENST00000616193 880 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 AC074276.2-201ENST00000619891 348 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 AL162233.1-201ENST00000620014 944 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.29□□□□□ -1.4
POLR2AP24928 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.29□□□□□ -1.4
POLR2AP24928 AC073869.8-201ENST00000641806 335 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
POLR2AP24928 AC007114.2-201ENST00000576014 4281 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.29□□□□□ -1.4
POLR2AP24928 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.29□□□□□ -1.4
POLR2AP24928 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
POLR2AP24928 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
POLR2AP24928 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
POLR2AP24928 BX284613.1-201ENST00000452221 1641 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
POLR2AP24928 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
POLR2AP24928 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
POLR2AP24928 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
POLR2AP24928 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
POLR2AP24928 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
POLR2AP24928 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
POLR2AP24928 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
POLR2AP24928 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
POLR2AP24928 AC079741.1-201ENST00000321498 212 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 PCNPP4-201ENST00000414817 517 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.29□□□□□ -1.4
POLR2AP24928 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.29□□□□□ -1.4
POLR2AP24928 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.29□□□□□ -1.4
POLR2AP24928 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.29□□□□□ -1.4
POLR2AP24928 AC104634.1-201ENST00000452720 462 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 RSU1P1-201ENST00000453416 441 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 MTND2P30-201ENST00000456663 382 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 AC104629.2-201ENST00000468627 598 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 AC020898.1-201ENST00000474167 787 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 AC140172.1-201ENST00000502928 141 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.29□□□□□ -1.4
POLR2AP24928 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
POLR2AP24928 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.29□□□□□ -1.4
POLR2AP24928 OR4H6P-202ENST00000603819 340 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 AC073869.10-201ENST00000642016 354 ntBASIC6.29□□□□□ -1.4
POLR2AP24928 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
POLR2AP24928 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.29□□□□□ -1.4
POLR2AP24928 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.29□□□□□ -1.4
POLR2AP24928 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
POLR2AP24928 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.29□□□□□ -1.4
POLR2AP24928 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
POLR2AP24928 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
POLR2AP24928 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
POLR2AP24928 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.28□□□□□ -1.4
POLR2AP24928 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
POLR2AP24928 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
POLR2AP24928 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.28□□□□□ -1.4
POLR2AP24928 AL009179.1-201ENST00000406085 265 ntBASIC6.28□□□□□ -1.4
POLR2AP24928 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms