Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 Z95114.1-201ENST00000624264 14574 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HLA-DOAP06340 OR4F13P-202ENST00000560066 2054 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
HLA-DOAP06340 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 RNU4-39P-201ENST00000362455 127 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 SNORA67-201ENST00000384423 137 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 RNU6-1000P-201ENST00000391066 106 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HLA-DOAP06340 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 RPS26P38-201ENST00000414476 348 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 METTL15P3-201ENST00000415522 1221 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 SRSF1P1-201ENST00000424058 520 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 UBE2D3P3-201ENST00000426992 425 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 CETN4P-201ENST00000432407 469 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 GSTM5P1-201ENST00000434751 660 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 OR52B5P-201ENST00000435337 951 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 RPS11P7-201ENST00000442125 465 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 EEF1B2P5-201ENST00000444820 548 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 AL672138.1-201ENST00000450604 1015 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 RN7SL610P-201ENST00000463845 291 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 AC008410.1-201ENST00000483777 339 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 AC004815.1-201ENST00000484185 331 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 HMGB1P44-201ENST00000508597 572 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 RNU6-1102P-201ENST00000516149 96 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 AC084759.1-201ENST00000561168 290 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HLA-DOAP06340 AC090286.3-201ENST00000573133 187 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 AP005403.1-201ENST00000579720 229 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 SETP3-201ENST00000581726 813 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 AC037198.3-201ENST00000616754 526 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 AC073342.3-201ENST00000624211 193 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 OR52B5P-202ENST00000641118 1110 ntBASIC6.5□□□□□ -1.37
HLA-DOAP06340 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
HLA-DOAP06340 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HLA-DOAP06340 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HLA-DOAP06340 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HLA-DOAP06340 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
HLA-DOAP06340 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-DOAP06340 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-DOAP06340 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-DOAP06340 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-DOAP06340 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-DOAP06340 AL133388.1-201ENST00000404509 287 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 MTCO2P8-201ENST00000412213 658 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 AC013268.2-201ENST00000420753 337 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-DOAP06340 AC108075.1-201ENST00000424692 529 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 AC092634.2-201ENST00000428146 1010 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 KRT8P51-201ENST00000438938 274 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 PTMAP6-201ENST00000439110 327 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 AL645931.1-201ENST00000439737 410 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 AC245047.2-201ENST00000441060 530 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-DOAP06340 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-DOAP06340 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 RPL32P9-201ENST00000487963 407 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-DOAP06340 RPL15P21-201ENST00000495592 567 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 AC008953.1-201ENST00000497334 318 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 BOLA3P3-201ENST00000505182 232 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 VTA1P2-201ENST00000520205 911 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 OR5AM1P-201ENST00000532136 1032 ntBASIC6.49□□□□□ -1.37
HLA-DOAP06340 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.49□□□□□ -1.37
HLA-DOAP06340 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms