Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 TET1P1-201ENST00000426627 2301 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 HCFC2P1-201ENST00000392864 1592 ntBASIC4.7□□□□□ -1.66
HLA-DPB1P04440 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HLA-DPB1P04440 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AP001284.1-201ENST00000528393 2118 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AC006210.2-201ENST00000367074 1545 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 RNA5SP242-201ENST00000364171 118 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 SNORA16A-201ENST00000384342 137 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AC005522.1-201ENST00000395416 346 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 RN7SKP16-201ENST00000410180 299 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 HSPE1P16-201ENST00000426640 348 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AC012075.1-201ENST00000436549 580 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AL031584.1-201ENST00000447169 754 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 MRPL35P2-201ENST00000448009 511 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AC079168.1-201ENST00000458741 345 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AL591473.1-201ENST00000464297 313 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 RN7SL717P-201ENST00000478343 297 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 NPM1P21-201ENST00000513394 762 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 MIR1273E-201ENST00000581165 102 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 MIR4310-201ENST00000582950 57 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AC104695.2-201ENST00000605056 775 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AC004477.3-201ENST00000614061 590 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AC063976.2-201ENST00000425667 3556 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 AC090220.1-201ENST00000593078 1699 ntBASIC4.69□□□□□ -1.66
HLA-DPB1P04440 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DPB1P04440 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 GABARAPL3-201ENST00000412799 354 ntBASIC4.68□□□□□ -1.66
HLA-DPB1P04440 Z93019.1-201ENST00000416450 973 ntBASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AL513325.1-201ENST00000417716 1034 ntBASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 BTF3P6-201ENST00000448054 499 ntBASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AL672138.1-201ENST00000450604 1015 ntBASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 RANP1-206ENST00000455094 651 ntBASIC4.68□□□□□ -1.66
HLA-DPB1P04440 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 RN7SKP46-201ENST00000515942 234 ntBASIC4.68□□□□□ -1.66
HLA-DPB1P04440 IGLVIV-64-201ENST00000518581 301 ntBASIC4.68□□□□□ -1.66
HLA-DPB1P04440 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AC093591.2-201ENST00000565254 3843 ntBASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AC020978.7-201ENST00000575953 1187 ntBASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AC009597.2-201ENST00000604659 592 ntBASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AC011626.1-201ENST00000604710 562 ntBASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AL157762.1-201ENST00000619612 415 ntBASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 AL078595.2-201ENST00000605309 1780 ntBASIC4.68□□□□□ -1.66
HLA-DPB1P04440 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
HLA-DPB1P04440 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DPB1P04440 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms