Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC091042.1-201ENST00000579213 173 ntBASIC8.01□□□□□ -1.13
RAPGEF3O95398 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC8.01□□□□□ -1.13
RAPGEF3O95398 AC011453.2-201ENST00000603737 729 ntBASIC8.01□□□□□ -1.13
RAPGEF3O95398 HIRAP1-201ENST00000605318 787 ntBASIC8.01□□□□□ -1.13
RAPGEF3O95398 AC084036.1-201ENST00000609190 508 ntBASIC8.01□□□□□ -1.13
RAPGEF3O95398 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC8.01□□□□□ -1.13
RAPGEF3O95398 AC135068.12-201ENST00000637370 931 ntBASIC8.01□□□□□ -1.13
RAPGEF3O95398 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
RAPGEF3O95398 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RAPGEF3O95398 AC011933.2-201ENST00000578539 2790 ntBASIC8.01□□□□□ -1.13
RAPGEF3O95398 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.01□□□□□ -1.13
RAPGEF3O95398 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RAPGEF3O95398 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RAPGEF3O95398 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
RAPGEF3O95398 AL034549.2-201ENST00000618285 3373 ntBASIC8.01□□□□□ -1.13
RAPGEF3O95398 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC8□□□□□ -1.13
RAPGEF3O95398 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
RAPGEF3O95398 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC8□□□□□ -1.13
RAPGEF3O95398 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
RAPGEF3O95398 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8□□□□□ -1.13
RAPGEF3O95398 SAMM50P1-201ENST00000455403 1399 ntBASIC8□□□□□ -1.13
RAPGEF3O95398 AC114774.1-201ENST00000507410 1770 ntBASIC8□□□□□ -1.13
RAPGEF3O95398 SDAD1P1-202ENST00000524156 2051 ntBASIC8□□□□□ -1.13
RAPGEF3O95398 MIR1182-201ENST00000408363 97 ntBASIC8□□□□□ -1.13
RAPGEF3O95398 RNF10P1-201ENST00000418589 369 ntBASIC8□□□□□ -1.13
RAPGEF3O95398 OR52J1P-201ENST00000450596 932 ntBASIC8□□□□□ -1.13
RAPGEF3O95398 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC8□□□□□ -1.13
RAPGEF3O95398 OR7E10P-201ENST00000526420 991 ntBASIC8□□□□□ -1.13
RAPGEF3O95398 AC137627.1-201ENST00000545761 289 ntBASIC8□□□□□ -1.13
RAPGEF3O95398 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC8□□□□□ -1.13
RAPGEF3O95398 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC8□□□□□ -1.13
RAPGEF3O95398 AC006453.5-201ENST00000636451 619 ntBASIC8□□□□□ -1.13
RAPGEF3O95398 AC119674.1-220ENST00000641502 1048 ntBASIC8□□□□□ -1.13
RAPGEF3O95398 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
RAPGEF3O95398 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
RAPGEF3O95398 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC8□□□□□ -1.13
RAPGEF3O95398 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
RAPGEF3O95398 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RAPGEF3O95398 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RAPGEF3O95398 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 EEF1A1P36-201ENST00000427807 1351 ntBASIC7.99□□□□□ -1.13
RAPGEF3O95398 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RAPGEF3O95398 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 AL049693.1-201ENST00000402760 611 ntBASIC7.99□□□□□ -1.13
RAPGEF3O95398 AC004074.1-201ENST00000421810 1063 ntBASIC7.99□□□□□ -1.13
RAPGEF3O95398 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RAPGEF3O95398 RSU1P1-201ENST00000453416 441 ntBASIC7.99□□□□□ -1.13
RAPGEF3O95398 MTND6P32-201ENST00000457611 483 ntBASIC7.99□□□□□ -1.13
RAPGEF3O95398 AC092754.1-201ENST00000472975 479 ntBASIC7.99□□□□□ -1.13
RAPGEF3O95398 RN7SL423P-201ENST00000486202 304 ntBASIC7.99□□□□□ -1.13
RAPGEF3O95398 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 PANCR-201ENST00000503456 493 ntTSL 5 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 RN7SKP157-201ENST00000516174 282 ntBASIC7.99□□□□□ -1.13
RAPGEF3O95398 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RAPGEF3O95398 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 RPAP2P1-201ENST00000603626 1168 ntBASIC7.99□□□□□ -1.13
RAPGEF3O95398 AL671309.1-201ENST00000603750 544 ntBASIC7.99□□□□□ -1.13
RAPGEF3O95398 AC009452.1-201ENST00000640823 606 ntBASIC7.99□□□□□ -1.13
RAPGEF3O95398 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RAPGEF3O95398 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RAPGEF3O95398 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
RAPGEF3O95398 DOCK11P1-201ENST00000553480 5932 ntBASIC7.99□□□□□ -1.13
RAPGEF3O95398 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RAPGEF3O95398 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RAPGEF3O95398 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.98□□□□□ -1.13
RAPGEF3O95398 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.98□□□□□ -1.13
RAPGEF3O95398 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
RAPGEF3O95398 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.98□□□□□ -1.13
RAPGEF3O95398 AC006600.2-201ENST00000624834 2506 ntBASIC7.98□□□□□ -1.13
RAPGEF3O95398 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RAPGEF3O95398 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RAPGEF3O95398 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RAPGEF3O95398 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.98□□□□□ -1.13
RAPGEF3O95398 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RAPGEF3O95398 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RAPGEF3O95398 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
RAPGEF3O95398 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RAPGEF3O95398 RNA5SP191-201ENST00000362585 102 ntBASIC7.98□□□□□ -1.13
RAPGEF3O95398 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.98□□□□□ -1.13
RAPGEF3O95398 MIR1193-201ENST00000408109 78 ntBASIC7.98□□□□□ -1.13
RAPGEF3O95398 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.98□□□□□ -1.13
RAPGEF3O95398 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC7.98□□□□□ -1.13
RAPGEF3O95398 MTND4LP7-201ENST00000431728 294 ntBASIC7.98□□□□□ -1.13
RAPGEF3O95398 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.98□□□□□ -1.13
RAPGEF3O95398 KNOP1P3-201ENST00000446933 426 ntBASIC7.98□□□□□ -1.13
RAPGEF3O95398 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.98□□□□□ -1.13
RAPGEF3O95398 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC7.98□□□□□ -1.13
RAPGEF3O95398 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC7.98□□□□□ -1.13
RAPGEF3O95398 RPL7P40-201ENST00000481703 745 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms