Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC2.2□□□□□ -2.06
USH2AO75445 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC2.2□□□□□ -2.06
USH2AO75445 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC2.2□□□□□ -2.06
USH2AO75445 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC2.2□□□□□ -2.06
USH2AO75445 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
USH2AO75445 ADAM24P-201ENST00000398655 2101 ntBASIC2.2□□□□□ -2.06
USH2AO75445 Z92545.1-201ENST00000411782 234 ntBASIC2.2□□□□□ -2.06
USH2AO75445 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC2.2□□□□□ -2.06
USH2AO75445 HSFY6P-201ENST00000445573 403 ntBASIC2.2□□□□□ -2.06
USH2AO75445 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.2□□□□□ -2.06
USH2AO75445 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 FTO-203ENST00000460382 1517 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC2.2□□□□□ -2.06
USH2AO75445 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC2.2□□□□□ -2.06
USH2AO75445 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 MYO18B-205ENST00000536101 8051 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 MAPK10-323ENST00000641493 3207 ntBASIC2.2□□□□□ -2.06
USH2AO75445 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC2.2□□□□□ -2.06
USH2AO75445 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC2.2□□□□□ -2.06
USH2AO75445 CLASP1-201ENST00000263710 8092 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC2.2□□□□□ -2.06
USH2AO75445 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC2.2□□□□□ -2.06
USH2AO75445 RPS26P8-201ENST00000393490 348 ntBASIC2.2□□□□□ -2.06
USH2AO75445 AL603766.1-201ENST00000407763 664 ntBASIC2.2□□□□□ -2.06
USH2AO75445 RIMKLBP2-201ENST00000424737 654 ntBASIC2.2□□□□□ -2.06
USH2AO75445 YY1P1-201ENST00000427625 668 ntBASIC2.2□□□□□ -2.06
USH2AO75445 AC236972.1-201ENST00000433225 199 ntBASIC2.2□□□□□ -2.06
USH2AO75445 BX679664.2-201ENST00000439282 283 ntBASIC2.2□□□□□ -2.06
USH2AO75445 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 AC079080.1-201ENST00000479841 822 ntBASIC2.2□□□□□ -2.06
USH2AO75445 ATP5LP5-201ENST00000483050 299 ntBASIC2.2□□□□□ -2.06
USH2AO75445 AC110768.1-201ENST00000509222 400 ntBASIC2.2□□□□□ -2.06
USH2AO75445 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
USH2AO75445 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC2.2□□□□□ -2.06
USH2AO75445 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC2.2□□□□□ -2.06
USH2AO75445 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC2.2□□□□□ -2.06
USH2AO75445 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC2.2□□□□□ -2.06
USH2AO75445 SALL4P2-201ENST00000423288 2910 ntBASIC2.2□□□□□ -2.06
USH2AO75445 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
USH2AO75445 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
USH2AO75445 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 ASCC3-204ENST00000369162 8146 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 SPATA31D5P-201ENST00000376459 4784 ntBASIC2.2□□□□□ -2.06
USH2AO75445 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
USH2AO75445 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
USH2AO75445 SNORA66-201ENST00000384792 133 ntBASIC2.2□□□□□ -2.06
USH2AO75445 SNORA77-201ENST00000408716 125 ntBASIC2.2□□□□□ -2.06
USH2AO75445 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC2.2□□□□□ -2.06
USH2AO75445 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 SLC25A18P1-201ENST00000449385 454 ntBASIC2.2□□□□□ -2.06
USH2AO75445 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 RN7SL435P-201ENST00000584418 282 ntBASIC2.2□□□□□ -2.06
USH2AO75445 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.2□□□□□ -2.06
USH2AO75445 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC2.2□□□□□ -2.06
USH2AO75445 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 AC009027.1-201ENST00000604510 479 ntBASIC2.2□□□□□ -2.06
USH2AO75445 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 MITF-203ENST00000328528 4680 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC2.2□□□□□ -2.06
USH2AO75445 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC2.2□□□□□ -2.06
USH2AO75445 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USH2AO75445 OR4F13P-202ENST00000560066 2054 ntBASIC2.2□□□□□ -2.06
USH2AO75445 CASC19-204ENST00000641001 2055 ntBASIC2.2□□□□□ -2.06
USH2AO75445 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
USH2AO75445 MIR7-3-201ENST00000384898 110 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms