Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.38□□□□□ -1.71
SDCBPO00560 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
SDCBPO00560 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.38□□□□□ -1.71
SDCBPO00560 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 AC005294.1-201ENST00000355509 281 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 RNA5SP234-201ENST00000363916 119 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.38□□□□□ -1.71
SDCBPO00560 AL035079.1-201ENST00000405210 287 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 OR4K12P-201ENST00000406538 961 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 AC007738.1-201ENST00000413892 348 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 AC013429.2-201ENST00000418798 781 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.38□□□□□ -1.71
SDCBPO00560 DSTNP5-201ENST00000427921 523 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.38□□□□□ -1.71
SDCBPO00560 AC012075.1-201ENST00000436549 580 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.38□□□□□ -1.71
SDCBPO00560 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.38□□□□□ -1.71
SDCBPO00560 AC079168.1-201ENST00000458741 345 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 RPL35AP19-201ENST00000469425 329 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 EIF1P7-201ENST00000487533 337 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 RN7SL466P-201ENST00000497546 295 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 MTATP6P1-201ENST00000514057 681 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 RNU6-513P-201ENST00000516104 104 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 YWHABP2-201ENST00000540201 713 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 AC068993.1-201ENST00000546724 589 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 AC127381.1-201ENST00000555979 939 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.38□□□□□ -1.71
SDCBPO00560 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.38□□□□□ -1.71
SDCBPO00560 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.38□□□□□ -1.71
SDCBPO00560 AC011840.5-201ENST00000582125 771 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.38□□□□□ -1.71
SDCBPO00560 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.38□□□□□ -1.71
SDCBPO00560 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.38□□□□□ -1.71
SDCBPO00560 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 RNA5SP440-201ENST00000612665 119 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.38□□□□□ -1.71
SDCBPO00560 BX005214.3-202ENST00000619809 325 ntBASIC4.38□□□□□ -1.71
SDCBPO00560 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.38□□□□□ -1.71
SDCBPO00560 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SDCBPO00560 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.38□□□□□ -1.71
SDCBPO00560 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
SDCBPO00560 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SDCBPO00560 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SDCBPO00560 TCP1P3-201ENST00000414406 1498 ntBASIC4.37□□□□□ -1.71
SDCBPO00560 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SDCBPO00560 AC006210.2-201ENST00000367074 1545 ntBASIC4.37□□□□□ -1.71
SDCBPO00560 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SDCBPO00560 AC020633.1-201ENST00000468439 2247 ntBASIC4.37□□□□□ -1.71
SDCBPO00560 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SDCBPO00560 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SDCBPO00560 RNA5SP335-201ENST00000363817 110 ntBASIC4.37□□□□□ -1.71
SDCBPO00560 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SDCBPO00560 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.37□□□□□ -1.71
SDCBPO00560 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SDCBPO00560 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.37□□□□□ -1.71
SDCBPO00560 GABARAPL3-201ENST00000412799 354 ntBASIC4.37□□□□□ -1.71
SDCBPO00560 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.37□□□□□ -1.71
SDCBPO00560 OR2AH1P-201ENST00000425717 928 ntBASIC4.37□□□□□ -1.71
SDCBPO00560 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.37□□□□□ -1.71
SDCBPO00560 CYCSP6-201ENST00000434498 302 ntBASIC4.37□□□□□ -1.71
SDCBPO00560 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.37□□□□□ -1.71
SDCBPO00560 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.37□□□□□ -1.71
SDCBPO00560 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.37□□□□□ -1.71
SDCBPO00560 AC105031.1-201ENST00000518550 476 ntBASIC4.37□□□□□ -1.71
SDCBPO00560 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.37□□□□□ -1.71
SDCBPO00560 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.37□□□□□ -1.71
SDCBPO00560 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.37□□□□□ -1.71
SDCBPO00560 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.37□□□□□ -1.71
SDCBPO00560 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SDCBPO00560 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.37□□□□□ -1.71
SDCBPO00560 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.37□□□□□ -1.71
SDCBPO00560 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.37□□□□□ -1.71
SDCBPO00560 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.37□□□□□ -1.71
SDCBPO00560 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
SDCBPO00560 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.37□□□□□ -1.71
SDCBPO00560 SAMMSON-209ENST00000641222 1100 ntBASIC4.37□□□□□ -1.71
SDCBPO00560 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SDCBPO00560 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SDCBPO00560 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.37□□□□□ -1.71
SDCBPO00560 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SDCBPO00560 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.37□□□□□ -1.71
SDCBPO00560 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SDCBPO00560 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.37□□□□□ -1.71
SDCBPO00560 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
SDCBPO00560 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SDCBPO00560 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms