Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC126175.1-201ENST00000617041 758 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC100757.1-201ENST00000616872 1835 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 MTND5P12-201ENST00000502851 1449 ntBASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.04□□□□□ -1.76
HLA-DRB4X5D2U9 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 AL731532.2-201ENST00000623542 1953 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 RNU1-146P-201ENST00000364015 165 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 CBX1P3-201ENST00000413296 527 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 RPL7AP49-201ENST00000429522 581 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 AL591438.1-201ENST00000433508 581 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 CYCSP24-201ENST00000445119 316 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 AC105399.1-202ENST00000447303 205 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 AL591473.1-201ENST00000464297 313 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 RN7SL273P-201ENST00000481561 299 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 MTATP6P1-201ENST00000514057 681 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 AC090022.1-201ENST00000546569 311 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 BNIP3P1-201ENST00000547295 580 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 RN7SL356P-201ENST00000582228 248 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 AC104695.2-201ENST00000605056 775 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 AC109583.2-201ENST00000617367 129 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 AC022106.2-201ENST00000620114 757 ntBASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DRB4X5D2U9 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.77
HLA-DRB4X5D2U9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.77
HLA-DRB4X5D2U9 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
HLA-DRB4X5D2U9 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
HLA-DRB4X5D2U9 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 DDX18P6-201ENST00000450119 1997 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 RN7SKP124-201ENST00000364730 341 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 DBIP1-201ENST00000401435 260 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AL391422.1-201ENST00000402155 436 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 PCNPP4-201ENST00000414817 517 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AC104333.2-201ENST00000422630 192 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 SETP10-201ENST00000424368 814 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 PRUNEP1-201ENST00000425846 705 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AC104843.2-201ENST00000427666 297 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 GSTM5P1-201ENST00000434751 660 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AP000281.1-201ENST00000444036 316 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AC100832.1-201ENST00000471945 383 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AC092754.1-201ENST00000472975 479 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 AC135999.1-201ENST00000478962 479 ntBASIC4.02□□□□□ -1.77
HLA-DRB4X5D2U9 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms