Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 MTCYBP34-201ENST00000439552 670 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 GTF3AP5-201ENST00000442645 697 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 RN7SL390P-201ENST00000470634 284 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 AC007537.2-201ENST00000472093 511 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 GARSP1-201ENST00000570895 719 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 MIR4732-201ENST00000581873 76 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 MIR4999-201ENST00000585029 91 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 AL078623.1-201ENST00000602702 907 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 AP001521.2-201ENST00000608772 546 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 AP003122.6-201ENST00000623831 495 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AL031651.1-201ENST00000615357 1438 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 QRSL1P1-201ENST00000400977 1540 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 RN7SKP86-201ENST00000410454 332 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 RPL7P8-201ENST00000411964 730 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AJ239321.1-201ENST00000424255 564 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC079807.1-201ENST00000429993 481 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AL512286.1-201ENST00000439244 400 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 RPSAP40-201ENST00000442343 891 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC021146.7-201ENST00000509604 775 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC104136.1-201ENST00000512969 394 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 OR4A12P-201ENST00000530847 918 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 HPRT1P3-201ENST00000539521 576 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 OR11J2P-201ENST00000555298 907 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 RBM22P1-201ENST00000578589 1214 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 RN7SL230P-201ENST00000580835 303 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AL499605.1-201ENST00000604628 403 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 COX6CP4-201ENST00000605798 228 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AL132822.1-201ENST00000617063 513 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 TTK-211ENST00000627129 240 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 ZNF733P-202ENST00000444809 1573 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 RAD17P2-201ENST00000451754 1977 ntBASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
PDZRN3Q9UPQ7 MROH3P-201ENST00000435735 2676 ntBASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.79□□□□□ -1
PDZRN3Q9UPQ7 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms