Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 TMSB4XP2-201ENST00000335179 210 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 RNU5E-10P-201ENST00000363506 118 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 RNU1-59P-201ENST00000364829 162 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AL360271.1-201ENST00000395679 510 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AL096800.1-201ENST00000405326 893 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AL121878.1-201ENST00000418638 859 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 PTP4A1P1-201ENST00000420539 515 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AL606495.1-201ENST00000422100 813 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 MTND4LP13-201ENST00000425022 298 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AL512661.1-201ENST00000434586 1253 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 RPL7P33-201ENST00000444159 742 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AL096829.2-201ENST00000446582 742 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 METTL15P1-201ENST00000481421 1045 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 RN7SL423P-201ENST00000486202 304 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AC005351.1-201ENST00000511152 786 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AC021451.1-201ENST00000523498 1129 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 OR8G5-201ENST00000524943 1041 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AP000859.1-201ENST00000525536 307 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AP003066.2-201ENST00000529375 555 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 MTND3P12-201ENST00000559068 328 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 MIR4509-3-201ENST00000578671 94 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 MIR4509-2-201ENST00000583920 94 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AC100767.2-201ENST00000604840 693 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AC093424.1-201ENST00000604999 338 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AC145423.1-201ENST00000605712 336 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AC015849.2-201ENST00000605738 409 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 U1.25-201ENST00000614085 162 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AC009159.2-201ENST00000617603 606 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 MIR4509-1-201ENST00000618224 94 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 U1.31-201ENST00000620022 160 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AC093875.1-201ENST00000623688 504 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 CU459211.1-201ENST00000635667 749 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 AC079776.5-201ENST00000641920 211 ntBASIC5.98□□□□□ -1.45
DKK3Q9UBP4 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
DKK3Q9UBP4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AL353796.1-201ENST00000561542 3241 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AL161756.3-201ENST00000641216 2071 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 MIR137-201ENST00000385223 102 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 SNORA17A-201ENST00000391185 133 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 ST13P16-201ENST00000401760 781 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AL354868.1-201ENST00000417077 482 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 HYALP1-201ENST00000417674 1279 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 RPS4XP5-201ENST00000419038 768 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 MTND2P16-201ENST00000419987 799 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 CHEK2P5-201ENST00000423877 246 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC092634.2-201ENST00000428146 1010 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 PCBP2P1-201ENST00000437262 977 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 MTCO2P20-201ENST00000437339 673 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 SNRPFP2-201ENST00000440710 251 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 CUBNP2-201ENST00000443534 1139 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 ACA64.4-201ENST00000459070 127 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 AC098583.1-201ENST00000480875 255 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 NPM1P29-201ENST00000483112 803 ntBASIC5.97□□□□□ -1.45
DKK3Q9UBP4 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DKK3Q9UBP4 FABP5P6-201ENST00000510588 409 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms