Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 RNA5SP448-201ENST00000363151 111 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 SNORD81.2-201ENST00000365153 76 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AL356432.1-201ENST00000405809 419 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 RN7SKP137-201ENST00000411074 307 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 RAB28P1-201ENST00000411517 641 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AL161742.1-201ENST00000418154 584 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 RPSAP62-201ENST00000432596 833 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AL451074.3-201ENST00000437709 472 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 ARPC3P5-201ENST00000448802 534 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AC233279.1-201ENST00000455300 423 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 RPL23AP37-201ENST00000479658 549 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 SNORA19.2-201ENST00000516013 114 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 OR5AP1P-201ENST00000529730 940 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 OR6C73P-201ENST00000546432 358 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AL512360.1-201ENST00000555346 234 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 ANP32BP1-202ENST00000568553 737 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 MIR5192-201ENST00000579892 92 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 SS18L2P2-201ENST00000583960 235 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 VN1R107P-201ENST00000601784 209 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AC090425.1-201ENST00000610007 140 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 pRNA.12-201ENST00000614353 90 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 pRNA.3-201ENST00000615048 90 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AC006504.8-201ENST00000621046 635 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AC134503.1-201ENST00000633048 54 ntBASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC090643.1-201ENST00000623600 3100 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC007993.1-201ENST00000621298 2430 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 Y_RNA.86-201ENST00000363020 111 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 RNU6-1318P-201ENST00000365389 103 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 Y_RNA.401-201ENST00000383965 117 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 SNORA11.5-201ENST00000408163 128 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 RNA5SP118-201ENST00000410385 109 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AMD1P2-201ENST00000412936 992 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 SNRPEP10-201ENST00000420249 274 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 OR5W1P-201ENST00000423705 938 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 BX679664.2-201ENST00000439282 283 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 ARMC8P1-201ENST00000443069 1289 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 RPL7L1P11-201ENST00000446092 721 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC092570.2-201ENST00000452117 1143 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 OR7E7P-201ENST00000455678 1012 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 RPL12P40-201ENST00000467028 488 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 RPL34P22-201ENST00000468193 318 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms