Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC008629.2-201ENST00000503783 483 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 RAB5CP2-201ENST00000505368 637 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 SNORA81.2-201ENST00000516868 170 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 ASPH-225ENST00000522835 1258 ntTSL 2 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 NDUFC2-202ENST00000525085 495 ntTSL 3 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 LINC02439-201ENST00000538783 450 ntTSL 3 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 RASA4-217ENST00000538869 483 ntTSL 5 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AP000619.1-201ENST00000540293 1000 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 PDCD5P1-201ENST00000543528 309 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 CHURC1-202ENST00000548752 439 ntTSL 2 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AC018552.3-201ENST00000567416 561 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 FAM95B1-209ENST00000590863 789 ntTSL 2 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AL953862.2-201ENST00000603089 820 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AC008782.1-201ENST00000603386 430 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AL136295.6-201ENST00000610486 658 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AC244093.2-201ENST00000620102 524 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AC093648.1-201ENST00000623546 606 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AMZ2-205ENST00000577866 1492 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 CCDC162P-202ENST00000368966 6751 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AC009902.3-201ENST00000606235 2172 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 EFCAB10-205ENST00000486180 1550 ntAPPRIS P5 TSL 1 (best) BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 CYP4A11-204ENST00000462347 1775 ntTSL 5 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 OR5E1P-201ENST00000305754 927 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 Y_RNA.279-201ENST00000364763 95 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 VN2R17P-201ENST00000391712 832 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 RN7SKP188-201ENST00000410789 317 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 RPS5P2-201ENST00000415238 640 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 TRPC6P-201ENST00000421233 880 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AC073188.2-201ENST00000424036 701 ntTSL 5 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AC006548.1-201ENST00000427470 102 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 FTLP2-201ENST00000431458 528 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 RPL12P17-201ENST00000432393 498 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AC012501.2-201ENST00000437634 1281 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 LINC01006-205ENST00000440711 336 ntTSL 2 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AC083939.1-201ENST00000445475 126 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 TAAR3P-201ENST00000466706 1078 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 TAAR3P-202ENST00000481759 1025 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 HMGN1P12-201ENST00000499125 195 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 RN7SKP82-201ENST00000516786 223 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 GOT1L1-202ENST00000518826 497 ntTSL 2 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 IGKV2D-18-201ENST00000519785 375 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 SDC2-207ENST00000522911 677 ntTSL 3 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 LINC00681-201ENST00000530150 504 ntTSL 2 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AP001360.1-201ENST00000534055 518 ntTSL 2 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AC024224.1-201ENST00000538284 609 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AC018448.2-201ENST00000548295 305 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 RN7SL15P-201ENST00000582825 301 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 MIR6511A2-201ENST00000611011 67 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 MIR8075-201ENST00000614354 80 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 MIR6511A3-201ENST00000615389 67 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AC004466.3-201ENST00000615576 546 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 MIR6511A4-201ENST00000615860 67 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 MIR6124-201ENST00000617177 85 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 MIR6511A1-201ENST00000617664 67 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AC239600.2-201ENST00000619615 1165 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 YWHAEP7-203ENST00000622054 312 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 CR381572.1-201ENST00000625098 102 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AC245100.4-207ENST00000640776 1082 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 AC004158.1-201ENST00000564508 4319 ntBASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms