Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 AL353684.1-201ENST00000622677 1120 ntBASIC5.56□□□□□ -1.52
SIX2Q9NPC8 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 SNORA67-201ENST00000384423 137 ntBASIC5.55□□□□□ -1.52
SIX2Q9NPC8 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AL512422.1-201ENST00000407033 553 ntBASIC5.55□□□□□ -1.52
SIX2Q9NPC8 RN7SKP59-201ENST00000410520 314 ntBASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 CFL1P1-202ENST00000432948 411 ntBASIC5.55□□□□□ -1.52
SIX2Q9NPC8 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 RPS11P7-201ENST00000442125 465 ntBASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 SIAH1P1-201ENST00000479411 923 ntBASIC5.55□□□□□ -1.52
SIX2Q9NPC8 OR52A4P-202ENST00000481634 799 ntBASIC5.55□□□□□ -1.52
SIX2Q9NPC8 RPS4XP1-201ENST00000482189 787 ntBASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 UGT2A3P7-201ENST00000510485 734 ntBASIC5.55□□□□□ -1.52
SIX2Q9NPC8 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AC010503.3-201ENST00000594355 540 ntBASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AC018695.5-201ENST00000605872 315 ntBASIC5.55□□□□□ -1.52
SIX2Q9NPC8 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.55□□□□□ -1.52
SIX2Q9NPC8 AL118508.4-201ENST00000624142 1176 ntBASIC5.55□□□□□ -1.52
SIX2Q9NPC8 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SIX2Q9NPC8 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 RN7SKP162-201ENST00000363605 345 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 RN7SKP160-201ENST00000363804 340 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AC083799.1-201ENST00000366451 910 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AC013442.1-201ENST00000397347 228 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 OR3A2-201ENST00000408891 1076 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AL139148.1-201ENST00000427122 680 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AL121776.1-201ENST00000429337 372 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 BX323845.1-201ENST00000432417 179 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AL391987.1-201ENST00000441025 200 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 TCEA1P3-201ENST00000443005 880 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 RN7SL101P-201ENST00000496350 279 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AL136038.1-201ENST00000497246 351 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AC021733.2-201ENST00000518830 497 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AP003168.1-201ENST00000530091 307 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 IMMP1LP3-201ENST00000604197 224 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AL391597.1-201ENST00000618707 694 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 AC135068.12-201ENST00000637370 931 ntBASIC5.54□□□□□ -1.52
SIX2Q9NPC8 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms