Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 RN7SKP216-201ENST00000411050 312 ntBASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 AC093162.1-201ENST00000419682 124 ntBASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 KATNBL1P2-201ENST00000433311 835 ntBASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 PRPF38AP1-201ENST00000451976 933 ntBASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 AC079168.1-201ENST00000458741 345 ntBASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 RPS12P31-201ENST00000491419 398 ntBASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 RN7SKP147-201ENST00000517154 244 ntBASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 AP000676.2-201ENST00000529711 301 ntBASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 RN7SL290P-201ENST00000578661 300 ntBASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 AL049539.1-201ENST00000611964 459 ntBASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 AC093671.1-201ENST00000624981 2929 ntBASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KIAA1549Q9HCM3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 OR8V1P-201ENST00000395193 873 ntBASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 RN7SKP213-201ENST00000410746 298 ntBASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 snoU13.20-201ENST00000459180 104 ntBASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 RPS23P1-201ENST00000491662 432 ntBASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 RN7SL441P-201ENST00000492388 296 ntBASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 GLUD1P3-202ENST00000508551 200 ntBASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 AC013701.1-201ENST00000522657 465 ntBASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 AL627230.1-201ENST00000613077 211 ntBASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 AL591926.8-201ENST00000616876 211 ntBASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 AC074101.1-201ENST00000637861 241 ntBASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 CASC19-221ENST00000641309 1382 ntBASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.65□□□□□ -1.67
KIAA1549Q9HCM3 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 RN7SKP115-201ENST00000363177 317 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AL035079.1-201ENST00000405210 287 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 KNOP1P3-201ENST00000446933 426 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 NPM1P28-201ENST00000492269 840 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC027369.5-201ENST00000533838 755 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC027216.1-201ENST00000577726 685 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC009597.2-201ENST00000604659 592 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AL133406.3-201ENST00000606817 541 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AP005131.7-201ENST00000610087 611 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 MIR6748-201ENST00000610433 71 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 MIR6839-201ENST00000620425 113 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AP001153.1-201ENST00000641024 338 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC004158.1-201ENST00000564508 4319 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms