Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A2Q9H9S3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC009135.2-201ENST00000624136 1768 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC005332.9-201ENST00000620266 2921 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC010894.1-201ENST00000313760 361 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 RNA5SP188-201ENST00000362916 129 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 SNORA40.2-201ENST00000390847 128 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC026310.1-201ENST00000396004 378 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 RNU6-757P-201ENST00000410334 100 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 RNA5SP155-201ENST00000411154 129 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 OR2B8P-201ENST00000432841 938 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 RPEP4-201ENST00000437636 602 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 RPL12P49-201ENST00000441100 121 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AL591503.2-201ENST00000442314 1005 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 MGAT2P1-201ENST00000449718 797 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AL034369.1-201ENST00000453808 477 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 RN7SL502P-201ENST00000481857 290 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC015524.1-201ENST00000491585 472 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 RPS6P4-201ENST00000494693 758 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC084024.2-201ENST00000503480 791 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC008429.2-201ENST00000523057 864 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 HIGD1AP10-201ENST00000527837 282 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AL139174.1-201ENST00000531489 886 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC027104.1-201ENST00000563702 681 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 RN7SL208P-201ENST00000577964 296 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC079089.3-201ENST00000603094 673 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AL136363.2-201ENST00000604173 851 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC006270.3-201ENST00000605967 1036 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC004223.4-201ENST00000612426 332 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 MIR7854-201ENST00000620068 65 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC114546.4-201ENST00000624413 369 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AL008636.1-201ENST00000625038 1018 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 AC092646.2-201ENST00000431242 2095 ntBASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A2Q9H9S3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AC027279.4-201ENST00000624371 2072 ntBASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SEC61A2Q9H9S3 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms