Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 LINC02362-203ENST00000617323 2044 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 ABCA11P-202ENST00000504019 2110 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AL391994.1-201ENST00000254724 282 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 Y_RNA.14-201ENST00000362415 103 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RNA5SP260-201ENST00000363849 111 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-236P-201ENST00000363886 106 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-266P-201ENST00000364225 107 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-1325P-201ENST00000364905 105 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-354P-201ENST00000383862 107 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-483P-201ENST00000384088 108 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-1032P-201ENST00000384100 107 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-610P-201ENST00000384264 107 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-472P-201ENST00000384299 107 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-1297P-201ENST00000384415 104 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RNA5SP23-201ENST00000391006 105 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RNY4P36-201ENST00000391116 96 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 ISY1-202ENST00000393292 988 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 GSTA9P-201ENST00000406231 611 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RNA5SP177-201ENST00000410122 107 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 SNORA79B-201ENST00000410557 148 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RNU4-74P-201ENST00000411280 161 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RN7SKP30-201ENST00000411373 334 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 PGBD4P6-201ENST00000421501 610 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 FDPSP6-201ENST00000425091 512 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AL590682.1-201ENST00000437248 344 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC079781.1-201ENST00000441505 394 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AL451074.4-201ENST00000447545 470 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 TVP23CP1-201ENST00000450317 639 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC233982.1-201ENST00000451247 436 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 HMGB1P26-201ENST00000452520 628 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC002553.2-201ENST00000453217 340 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 MRPS21P1-201ENST00000453850 223 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC117395.2-201ENST00000463122 1128 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RN7SL456P-201ENST00000469290 295 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC128713.1-201ENST00000471495 306 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RPS17P11-201ENST00000474297 293 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC005550.2-201ENST00000476382 318 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RPL7AP30-201ENST00000482859 796 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RPS12P31-201ENST00000491419 398 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 PFN2-213ENST00000494827 793 ntTSL 4 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC233724.1-201ENST00000503894 233 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 EIF3KP1-201ENST00000513279 656 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 SCARNA20.1-201ENST00000516009 138 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RN7SKP256-201ENST00000517201 314 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 Y_RNA.721-201ENST00000517207 102 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AP001646.2-201ENST00000528645 1156 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AP004607.5-201ENST00000532034 217 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms