Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 AC112255.1-201ENST00000624070 2493 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 ICE2P1-201ENST00000512800 1849 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX18Q96RF0 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 AC097063.1-201ENST00000426714 1797 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 XKRYP4-201ENST00000414395 483 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 LIPT1P1-201ENST00000415870 1186 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 GNG5P5-201ENST00000420444 220 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 MTCYBP29-201ENST00000436327 1006 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 AL138787.1-202ENST00000437804 898 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 RPSAP40-201ENST00000442343 891 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 XKRYP5-201ENST00000449659 483 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 AC073594.1-201ENST00000462065 364 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 RPL5P13-201ENST00000462840 709 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 RN7SL352P-201ENST00000466002 277 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 GM2AP2-201ENST00000491764 562 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 PFN1P8-201ENST00000497012 543 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 SNORA74.1-201ENST00000516320 180 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 AC092954.1-201ENST00000609121 445 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 AC100847.1-201ENST00000611316 481 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 AC092159.4-201ENST00000624944 550 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 AC016583.1-201ENST00000624221 2431 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 AC068870.3-201ENST00000625077 2536 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 MTND5P31-201ENST00000419366 1374 ntBASIC5.5□□□□□ -1.53
SNX18Q96RF0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SNX18Q96RF0 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX18Q96RF0 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX18Q96RF0 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX18Q96RF0 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 HSPD1P11-201ENST00000508643 1702 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX18Q96RF0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX18Q96RF0 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX18Q96RF0 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SNX18Q96RF0 AL603865.2-201ENST00000401679 213 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 AL096711.1-201ENST00000404780 554 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 MIR1282-201ENST00000408865 101 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 RN7SKP166-201ENST00000410812 305 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 AC107081.1-201ENST00000414975 361 ntBASIC5.49□□□□□ -1.53
SNX18Q96RF0 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms