Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC023245.2-201ENST00000530760 2978 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 AC012020.1-201ENST00000624541 1728 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 ZNF812P-201ENST00000457674 1694 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 MARK2P4-201ENST00000503381 2380 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 HSPD1P9-201ENST00000420325 1636 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.31□□□□□ -1.24
SYNGAP1Q96PV0 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 FUNDC2P3-201ENST00000334716 533 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 ZNF603P-201ENST00000405613 487 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 RNU2-17P-201ENST00000410290 190 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC012519.1-201ENST00000424588 610 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 Z68868.1-201ENST00000429048 544 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 VDAC1P6-201ENST00000430062 855 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC112492.2-201ENST00000432774 1030 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AL357520.1-201ENST00000441557 453 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 H2AFZP6-201ENST00000444403 394 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC069528.1-202ENST00000482888 637 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 SNX18P24-201ENST00000505249 671 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC091965.2-201ENST00000512324 613 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 RN7SKP35-201ENST00000517210 151 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 IGHV4-55-201ENST00000520889 368 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 C1GALT1P3-201ENST00000522049 819 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC090651.1-201ENST00000567865 634 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC008507.3-201ENST00000585753 472 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC012254.4-201ENST00000588843 273 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 BUB1P1-201ENST00000603541 607 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC021749.1-201ENST00000604322 607 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AL353621.2-201ENST00000605340 133 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 MIR6748-201ENST00000610433 71 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC024884.1-201ENST00000620583 399 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC015660.5-201ENST00000623238 564 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC244258.1-201ENST00000637553 1071 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 FP325313.1-201ENST00000638228 703 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AC125238.2-201ENST00000430003 1440 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 LYARP1-201ENST00000436977 1501 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 CASC19-243ENST00000641588 1546 ntBASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SYNGAP1Q96PV0 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms