Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 PSMA2P2-201ENST00000504319 686 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AP002981.1-201ENST00000517692 975 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 RN7SL356P-201ENST00000582228 248 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AC092944.2-201ENST00000605443 889 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 AP003400.3-201ENST00000624904 346 ntBASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLHC1Q8NHS4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 RNU1-19P-201ENST00000363306 165 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 RN7SKP292-201ENST00000365522 317 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AC007618.1-201ENST00000366455 732 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AL133388.1-201ENST00000404509 287 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 TCP1P3-201ENST00000414406 1498 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 TNPO1P1-201ENST00000423641 1138 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 HSPD1P12-201ENST00000429127 1069 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AL450263.2-201ENST00000439400 589 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 RPS10P18-201ENST00000442662 495 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 RPL7L1P1-201ENST00000448259 785 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AC058823.1-201ENST00000485315 474 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 RN7SKP34-201ENST00000516142 244 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 RN7SKP70-201ENST00000516655 271 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AC112191.2-201ENST00000522428 333 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AC078878.1-201ENST00000539832 958 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AL513548.1-201ENST00000562904 1724 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AC105036.1-201ENST00000566222 271 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 MTCYBP13-201ENST00000578634 1093 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AC008833.1-201ENST00000611633 691 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 AL356752.1-201ENST00000615844 593 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 OR13C1P-202ENST00000641378 2919 ntBASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CLHC1Q8NHS4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 RNA5SP122-201ENST00000384457 108 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 RAB5CP1-201ENST00000395972 580 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 Z93019.1-201ENST00000416450 973 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AC002069.1-201ENST00000429649 1159 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 RPL12P17-201ENST00000432393 498 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AC002504.1-201ENST00000438281 691 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AL390119.1-201ENST00000440329 312 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 NPM1P39-201ENST00000449818 867 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AL672138.1-201ENST00000450604 1015 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AC245028.2-201ENST00000458673 253 ntBASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.09□□□□□ -1.59
CLHC1Q8NHS4 AC094085.1-201ENST00000468914 584 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms